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Journal Articles
- 2021
[j2]Casey A. Cole
, Nourhan S. Daigham, Gaohua Liu, Gaetano T. Montelione, Homayoun Valafar:
REDCRAFT: A computational platform using residual dipolar coupling NMR data for determining structures of perdeuterated proteins in solution. PLoS Comput. Biol. 17(2) (2021)- 2020
- [j1]Casey A. Cole, Caleb Parks, Julian Rachele, Homayoun Valafar:
Increased usability, algorithmic improvements and incorporation of data mining for structure calculation of proteins with REDCRAFT software package. BMC Bioinform. 21-S(9): 204 (2020)
Conference and Workshop Papers
- 2020
- [c3]Niharika Pandala, Casey A. Cole, Devaun McFarland, Anita Nag, Homayoun Valafar:
A Preliminary Investigation in the Molecular Basis of Host Shutoff Mechanism in SARS-CoV. BCB 2020: 32:1-32:9 - 2018
- [c2]Casey A. Cole, Kenneth L. Nesbitt, Homayoun Valafar:
Application of ensemble learning to the differential gene expression in left-right breast tumors. CIBCB 2018: 1-6 - 2017
- [c1]Casey A. Cole, James F. Thrasher, Scott M. Strayer, Homayoun Valafar:
Resolving ambiguities in accelerometer data due to location of sensor on wrist in application to detection of smoking gesture. BHI 2017: 489-492
Informal and Other Publications
- 2021
- [i7]Casey A. Cole, Rishi Mukhopadhyay, Hanin Omar, Mirko Hennig, Homayoun Valafar:
Structure Calculation and Reconstruction of Discrete State Dynamics from Residual Dipolar Couplings using REDCRAFT. CoRR abs/2103.10460 (2021) - 2020
- [i6]Chrisogonas O. Odhiambo, Casey A. Cole, Alaleh Torkjazi, Homayoun Valafar:
State Transition Modeling of the Smoking Behavior using LSTM Recurrent Neural Networks. CoRR abs/2001.02101 (2020) - [i5]Casey A. Cole, Bethany Janos, Dien Anshari, James F. Thrasher, Scott M. Strayer, Homayoun Valafar:
Recognition of Smoking Gesture Using Smart Watch Technology. CoRR abs/2003.02735 (2020) - [i4]Niharika Pandala, Casey A. Cole, Devaun McFarland, Anita Nag, Homayoun Valafar:
A Preliminary Investigation in the Molecular Basis of Host Shutoff Mechanism in SARS-CoV. CoRR abs/2007.13469 (2020) - [i3]Aaron Hein, Casey A. Cole, Homayoun Valafar:
An Investigation in Optimal Encoding of Protein Primary Sequence for Structure Prediction by Artificial Neural Networks. CoRR abs/2008.00539 (2020) - 2019
- [i2]Casey A. Cole, Caleb Parks, Julian Rachele, Homayoun Valafar:
Improvements of the REDCRAFT Software Package. CoRR abs/1911.08612 (2019) - [i1]Casey A. Cole, Christopher Ott, Diego Valdes, Homayoun Valafar:
PDBMine: A Reformulation of the Protein Data Bank to Facilitate Structural Data Mining. CoRR abs/1911.08614 (2019)
Coauthor Index
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