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Journal Articles
- 2025
[j11]Cristian Iperi, Álvaro Fernández-Ochoa, Guillermo Barturen, Jacques-Olivier Pers, Nathan Foulquier, Eléonore Bettacchioli, Marta E. Alarcón-Riquelme, Divi Cornec, Anne Bordron, Christophe Jamin
:
BiomiX, a user-friendly bioinformatic tool for democratized analysis and integration of multiomics data. BMC Bioinform. 26(1): 8 (2025)- 2024
- [j10]Ivo C. Leist, María Rivas-Torrubia, Marta E. Alarcón-Riquelme, Guillermo Barturen, Ivo Glynne Gut, Manuel Rueda:
Pheno-Ranker: a toolkit for comparison of phenotypic data stored in GA4GH standards and beyond. BMC Bioinform. 25(1): 373 (2024) - 2023
- [j9]Daniel Toro-Domínguez, Jordi Martorell-Marugan, Manuel Martínez-Bueno, Raúl López-Domínguez, Elena Carnero-Montoro, Guillermo Barturen, Daniel Goldman, Michelle Petri, Pedro Carmona-Saez, Marta E. Alarcón-Riquelme:
Response to the letter 'testing the effectiveness of MyPROSLE in classifying patients with lupus nephritis'. Briefings Bioinform. 25(1) (2023) - [j8]Jordi Martorell-Marugan, Marco Chierici, Giuseppe Jurman, Marta E. Alarcón-Riquelme, Pedro Carmona-Saez:
Differential diagnosis of systemic lupus erythematosus and Sjögren's syndrome using machine learning and multi-omics data. Comput. Biol. Medicine 152: 106373 (2023) - 2022
- [j7]Daniel Toro-Domínguez, Jordi Martorell-Marugan, Manuel Martínez-Bueno, Raúl López-Domínguez, Elena Carnero-Montoro, Guillermo Barturen, Daniel Goldman, Michelle Petri, Pedro Carmona-Saez, Marta E. Alarcón-Riquelme:
Scoring personalized molecular portraits identify Systemic Lupus Erythematosus subtypes and predict individualized drug responses, symptomatology and disease progression. Briefings Bioinform. 23(5) (2022) - 2021
- [j6]Daniel Toro-Domínguez, Juan Antonio Villatoro-García, Jordi Martorell-Marugan, Yolanda Román-Montoya, Marta E. Alarcón-Riquelme, Pedro Carmona-Saez:
A survey of gene expression meta-analysis: methods and applications. Briefings Bioinform. 22(2): 1694-1705 (2021) - [j5]Jordi Martorell-Marugan, Raúl López-Domínguez, Adrián García-Moreno, Daniel Toro-Domínguez, Juan Antonio Villatoro-García, Guillermo Barturen, Adoración Martín-Gómez, Kevin Troulé, Gonzalo Gómez-López, Fátima Al-Shahrour, Víctor González-Rumayor, María Peña-Chilet, Joaquín Dopazo, Julio Sáez-Rodríguez, Marta E. Alarcón-Riquelme, Pedro Carmona-Saez:
A comprehensive database for integrated analysis of omics data in autoimmune diseases. BMC Bioinform. 22(1): 343 (2021) - 2019
- [j4]Daniel Toro-Domínguez, Jordi Martorell-Marugan, Raúl López-Domínguez, Adrián García-Moreno, Víctor González-Rumayor, Marta E. Alarcón-Riquelme, Pedro Carmona-Saez:
ImaGEO: integrative gene expression meta-analysis from GEO database. Bioinform. 35(5): 880-882 (2019) - 2017
- [j3]B. Muchmore, Marta E. Alarcón-Riquelme:
CymeR: cytometry analysis using KNIME, docker and R. Bioinform. 33(5): 776-778 (2017) - [j2]Pedro Carmona-Saez, Nieves Varela, María José Luque, Daniel Toro-Domínguez, Jordi Martorell-Marugan, Marta E. Alarcón-Riquelme, Concepción Marañón:
Metagene projection characterizes GEN2.2 and CAL-1 as relevant human plasmacytoid dendritic cell models. Bioinform. 33(23): 3691-3695 (2017) - [j1]Jordi Martorell-Marugan, Daniel Toro-Domínguez, Marta E. Alarcón-Riquelme, Pedro Carmona-Saez:
MetaGenyo: a web tool for meta-analysis of genetic association studies. BMC Bioinform. 18(1): 563:1-563:6 (2017)
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