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Rainer Roehe

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Journal Articles

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2023
[j3]
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  - journals/bioinformatics/MattockMCRW23
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  - https://dblp.org/rec/journals/bioinformatics/MattockMCRW23
Jennifer Mattock, Marina Martínez-Álvaro, Matthew A Cleveland, Rainer Roehe, Mick Watson:
KOunt: a reproducible KEGG orthologue abundance workflow. Bioinform. 39(8) (2023)
2020
[j2]
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  - journals/tcbb/ZhengWDR20
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Huiru Zheng, Haiying Wang, Richard J. Dewhurst, Rainer Roehe:
Improving the Inference of Co-Occurrence Networks in the Bovine Rumen Microbiome. IEEE ACM Trans. Comput. Biol. Bioinform. 17(3): 858-867 (2020)
2019
[j1]
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  - journals/bioinformatics/StewartASRW19
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  - https://dblp.org/rec/journals/bioinformatics/StewartASRW19
Robert D. Stewart, Marc D. Auffret, Timothy J. Snelling, Rainer Roehe, Mick Watson:
MAGpy: a reproducible pipeline for the downstream analysis of metagenome-assembled genomes (MAGs). Bioinform. 35(12): 2150-2152 (2019)

Conference and Workshop Papers

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2020
[c9]
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  - conf/bibm/Wang0ZDR20
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Mengyuan Wang, Haiying Wang, Huiru Zheng, Richard J. Dewhurst, Rainer Roehe:
A multilayer co-occurrence network reveals the systemic difference of diet-based rumen microbiome associated with methane yield phenotype. BIBM 2020: 2855-2860
2019
[c8]
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  - conf/bibm/WangZWDR19
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Mengyuan Wang, Huiru Zheng, Haiying Wang, Richard J. Dewhurst, Rainer Roehe:
A knowledge driven mutual information-based analytical framework for the identification of rumen metabolites. BIBM 2019: 255-260
[c7]
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  - conf/bibm/ManningSRTWZKLW19
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Timmy Manning, Miguel Somarriba, Rainer Roehe, Simon Turner, Haiying Wang, Huiru Zheng, Brian Kelly, Jennifer Lynch, Paul Walsh:
Automated Object Tracking for Animal Behaviour Studies. BIBM 2019: 1876-1883
[c6]
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  - conf/bibm/WassanZWBWMDR19
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Jyotsna Talreja Wassan, Huiru Zheng, Haiying Wang, Fiona Browne, Paul Walsh, Timmy Manning, Richard J. Dewhurst, Rainer Roehe:
A Phylogeny-aware Feature Ranking for Classification of Cattle Rumen Microbiome. BIBM 2019: 1900-1906
2018
[c5]
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  - conf/bibm/WassanZBBWRDPKW18
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Jyotsna Talreja Wassan, Huiru Zheng, Fiona Browne, Jenna Bowen, Paul Walsh, Rainer Roehe, Richard J. Dewhurst, Cintia C. Palu, Brian Kelly, Haiying Wang:
An Integrative Framework for Functional Analysis of Cattle Rumen Microbiomes. BIBM 2018: 1854-1860
2017
[c4]
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  - conf/bibm/WangZDR17
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Haiying Wang, Huiru Zheng, Richard J. Dewhurst, Rainer Roehe:
Microbial co-presence and mutual-exclusion networks in the Bovine rumen microbiome. BIBM 2017: 114-119
[c3]
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  - conf/icic/WassanWBWKPKRDZ17
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Jyotsna Talreja Wassan, Haiying Wang, Fiona Browne, Paul Walsh, Brian Kelly, Cintia C. Palu, Nina Konstantinidou, Rainer Roehe, Richard J. Dewhurst, Huiru Zheng:
An Integrative Approach for the Functional Analysis of Metagenomic Studies. ICIC (2) 2017: 421-427
2016
[c2]
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  - conf/bibm/WangZBRDEHW16
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Haiying Wang, Huiru Zheng, Fiona Browne, Rainer Roehe, Richard J. Dewhurst, Felix Engel, Matthias L. Hemmje, Paul Walsh:
Analysis of rumen microbial community in cattle through the integration of metagenomic and network-based approaches. BIBM 2016: 198-203
[c1]
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  - conf/bibm/BrowneWZRDW16
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Fiona Browne, Haiying Wang, Huiru Zheng, Rainer Roehe, Richard J. Dewhurst, Paul Walsh:
A network analysis of methane and feed conversion genes in the rumen microbial community. BIBM 2016: 1477-1484

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