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2020 – today
- 2022
[j4]Christopher Pockrandt
, Martin Steinegger, Steven L. Salzberg:
PhyloCSF++: a fast and user-friendly implementation of PhyloCSF with annotation tools. Bioinform. 38(5): 1440-1442 (2022)- [j3]Christopher Pockrandt, Aleksey V. Zimin, Steven L. Salzberg:
Metagenomic classification with KrakenUniq on low-memory computers. J. Open Source Softw. 7(80): 4908 (2022) - 2021
- [j2]Ales Varabyou, Geo Pertea, Christopher Pockrandt, Mihaela Pertea:
TieBrush: an efficient method for aggregating and summarizing mapped reads across large datasets. Bioinform. 37(20): 3650-3651 (2021) - 2020
- [j1]Christopher Pockrandt, Mai Alzamel, Costas S. Iliopoulos, Knut Reinert:
GenMap: ultra-fast computation of genome mappability. Bioinform. 36(12): 3687-3692 (2020)
2010 – 2019
- 2019
- [b1]Christopher Pockrandt:
Approximate String Matching: Improving Data Structures and Algorithms. Free University of Berlin, Dahlem, Germany, 2019 - 2017
- [c1]Christopher Pockrandt, Marcel Ehrhardt, Knut Reinert:
EPR-Dictionaries: A Practical and Fast Data Structure for Constant Time Searches in Unidirectional and Bidirectional FM Indices. RECOMB 2017: 190-206 - [i2]Kiavash Kianfar, Christopher Pockrandt, Bahman Torkamandi, Haochen Luo, Knut Reinert:
FAMOUS: Fast Approximate string Matching using OptimUm search Schemes. CoRR abs/1711.02035 (2017) - 2016
- [i1]Christopher Pockrandt, Marcel Ehrhardt, Knut Reinert:
Constant-time and space-efficient unidirectional and bidirectional FM-indices using EPR-dictionaries. CoRR abs/1608.02413 (2016)
Coauthor Index
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