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Thomas Küstner
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Journal Articles
- 2024
[j15]Jiazhen Pan
, Manal Hamdi, Wenqi Huang, Kerstin Hammernik, Thomas Küstner, Daniel Rueckert:
Unrolled and rapid motion-compensated reconstruction for cardiac CINE MRI. Medical Image Anal. 91: 103017 (2024)- [j14]Jiazhen Pan, Wenqi Huang, Daniel Rueckert, Thomas Küstner, Kerstin Hammernik:
Motion-Compensated MR CINE Reconstruction With Reconstruction-Driven Motion Estimation. IEEE Trans. Medical Imaging 43(7): 2420-2433 (2024) - [j13]Aya Ghoul, Jiazhen Pan, Andreas Lingg, Jens Kübler, Patrick Krumm, Kerstin Hammernik, Daniel Rueckert, Sergios Gatidis, Thomas Küstner:
Attention-Aware Non-Rigid Image Registration for Accelerated MR Imaging. IEEE Trans. Medical Imaging 43(8): 3013-3026 (2024) - 2023
- [j12]Louisa Fay, Erick Cobos, Bin Yang, Sergios Gatidis, Thomas Küstner:
Avoiding Shortcut-Learning by Mutual Information Minimization in Deep Learning-Based Image Processing. IEEE Access 11: 64070-64086 (2023) - [j11]Marc Fischer, Thomas Küstner, Sofia Pappa, Thoralf Niendorf, Tobias Pischon, Thomas Kröncke, Stefanie Bette, Sara Schramm, Börge Schmidt, Johannes Haubold, Felix Nensa, Tobias Nonnenmacher, Viktoria Palm, Fabian Bamberg, Lena Kiefer, Fritz Schick, Bin Yang:
Identification of radiomic biomarkers in a set of four skeletal muscle groups on Dixon MRI of the NAKO MR study. BMC Medical Imaging 23(1): 104 (2023) - [j10]Kerstin Hammernik, Thomas Küstner, Burhaneddin Yaman, Zhengnan Huang, Daniel Rueckert, Florian Knoll, Mehmet Akçakaya:
Physics-Driven Deep Learning for Computational Magnetic Resonance Imaging: Combining physics and machine learning for improved medical imaging. IEEE Signal Process. Mag. 40(1): 98-114 (2023) - 2022
- [j9]Marcel Frueh, Andreas Schilling, Sergios Gatidis, Thomas Küstner:
Real Time Landmark Detection for Within- and Cross Subject Tracking With Minimal Human Supervision. IEEE Access 10: 81192-81202 (2022) - [j8]Marcel Frueh, Thomas Küstner, Marcel Nachbar, Daniela Thorwarth, Andreas Schilling, Sergios Gatidis:
Self-supervised learning for automated anatomical tracking in medical image data with minimal human labeling effort. Comput. Methods Programs Biomed. 225: 107085 (2022) - 2021
- [j7]Haikun Qi, Niccolo Fuin, Gastão Cruz, Jiazhen Pan, Thomas Küstner, Aurélien Bustin, René M. Botnar, Claudia Prieto:
Non-Rigid Respiratory Motion Estimation of Whole-Heart Coronary MR Images Using Unsupervised Deep Learning. IEEE Trans. Medical Imaging 40(1): 444-454 (2021) - [j6]Karim Armanious, Sherif Abdulatif, Wenbin Shi, Shashank Salian, Thomas Küstner, Daniel Weiskopf, Tobias Hepp, Sergios Gatidis, Bin Yang:
Age-Net: An MRI-Based Iterative Framework for Brain Biological Age Estimation. IEEE Trans. Medical Imaging 40(7): 1778-1791 (2021) - [j5]Thomas Küstner, Jiazhen Pan, Haikun Qi, Gastão Cruz, Christopher Gilliam, Thierry Blu, Bin Yang, Sergios Gatidis, René M. Botnar, Claudia Prieto:
LAPNet: Non-Rigid Registration Derived in k-Space for Magnetic Resonance Imaging. IEEE Trans. Medical Imaging 40(12): 3686-3697 (2021) - 2020
- [j4]Karim Armanious, Chenming Jiang, Marc Fischer, Thomas Küstner, Tobias Hepp, Konstantin Nikolaou, Sergios Gatidis, Bin Yang:
MedGAN: Medical image translation using GANs. Comput. Medical Imaging Graph. 79: 101684 (2020) - 2018
- [j3]Annika Liebgott, Thomas Küstner, Heiko Strohmeier, Tobias Hepp, Philipp Mangold, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Bin Yang, Sergios Gatidis:
ImFEATbox: a toolbox for extraction and analysis of medical image features. Int. J. Comput. Assist. Radiol. Surg. 13(12): 1881-1893 (2018) - 2017
- [j2]Thomas Kustner, Martin Schwartz, Petros Martirosian, Sergios Gatidis, Ferdinand Seith, Christopher Gilliam, Thierry Blu, Hadi Fayad, Dimitris Visvikis, Fritz Schick, Bin Yang, Holger Schmidt, Nina F. Schwenzer:
MR-based respiratory and cardiac motion correction for PET imaging. Medical Image Anal. 42: 129-144 (2017) - 2016
- [j1]Thomas Kustner, Christian Würslin, Sergios Gatidis, Petros Martirosian, Konstantin Nikolaou, Nina F. Schwenzer, Fritz Schick, Bin Yang, Holger Schmidt:
MR Image Reconstruction Using a Combination of Compressed Sensing and Partial Fourier Acquisition: ESPReSSo. IEEE Trans. Medical Imaging 35(11): 2447-2458 (2016)
Conference and Workshop Papers
- 2024
- [c20]Veronika Ecker, Marcel Früh, Bin Yang, Sergios Gatidis, Thomas Küstner:
Deep Regression for Biological Age Estimation in Multiple Organs: Investigations on 40, 000 Subjects of the UK Biobank. ICASSP 2024: 2255-2259 - [c19]Sarah Müller, Louisa Fay, Lisa M. Koch, Sergios Gatidis, Thomas Küstner, Philipp Berens:
Benchmarking Dependence Measures to Prevent Shortcut Learning in Medical Imaging. MLMI@MICCAI (2) 2024: 53-62 - 2023
- [c18]Paul Fischer, Thomas Küstner, Christian F. Baumgartner:
Uncertainty Estimation and Propagation in Accelerated MRI Reconstruction. UNSURE@MICCAI 2023: 84-94 - [c17]Jiazhen Pan, Suprosanna Shit, Özgün Turgut, Wenqi Huang, Hongwei Bran Li, Nil Stolt Ansó, Thomas Küstner, Kerstin Hammernik, Daniel Rueckert:
Global k-Space Interpolation for Dynamic MRI Reconstruction Using Masked Image Modeling. MICCAI (10) 2023: 228-238 - 2022
- [c16]Jiazhen Pan, Daniel Rueckert, Thomas Küstner, Kerstin Hammernik:
Learning-Based and Unrolled Motion-Compensated Reconstruction for Cardiac MR CINE Imaging. MICCAI (6) 2022: 686-696 - 2021
- [c15]Kerstin Hammernik, Jiazhen Pan, Daniel Rueckert, Thomas Küstner:
Motion-Guided Physics-Based Learning for Cardiac MRI Reconstruction. ACSCC 2021: 900-907 - [c14]Jiazhen Pan, Daniel Rueckert, Thomas Küstner, Kerstin Hammernik:
Efficient Image Registration Network for Non-Rigid Cardiac Motion Estimation. MLMIR@MICCAI 2021: 14-24 - 2020
- [c13]Thomas Küstner, Jiazhen Pan, Christopher Gilliam, Haikun Qi, Gastão Cruz, Kerstin Hammernik, Bin Yang, Thierry Blu, Daniel Rueckert, René M. Botnar, Claudia Prieto, Sergios Gatidis:
Deep-learning based motion-corrected image reconstruction in 4D magnetic resonance imaging of the body trunk. APSIPA 2020: 976-985 - [c12]Karim Armanious, Sherif Abdulatif, Anish Rao Bhaktharaguttu, Thomas Küstner, Tobias Hepp, Sergios Gatidis, Bin Yang:
Organ-Based Chronological Age Estimation Based on 3D MRI Scans. EUSIPCO 2020: 1225-1228 - [c11]Karim Armanious, Aastha Tanwar, Sherif Abdulatif, Thomas Küstner, Sergios Gatidis, Bin Yang:
Unsupervised Adversarial Correction of Rigid MR Motion Artifacts. ISBI 2020: 1494-1498 - [c10]Haikun Qi, Niccolo Fuin, Thomas Küstner, René M. Botnar, Claudia Prieto:
Accelerated 4D Respiratory Motion-Resolved Cardiac MRI with a Model-Based Variational Network. MICCAI (6) 2020: 427-435 - 2019
- [c9]Karim Armanious, Chenming Jiang, Sherif Abdulatif, Thomas Küstner, Sergios Gatidis, Bin Yang:
Unsupervised Medical Image Translation Using Cycle-MedGAN. EUSIPCO 2019: 1-5 - [c8]Karim Armanious, Sergios Gatidis, Konstantin Nikolaou, Bin Yang, Thomas Kustner:
Retrospective Correction Of Rigid And Non-Rigid MR Motion Artifacts Using Gans. ISBI 2019: 1550-1554 - 2018
- [c7]Sebastian Milde, Annika Liebgott, Ziwei Wu, Wenyi Feng, Jiahuan Yang, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Sergios Gatidis, Fritz Schick, Bin Yang, Thomas Kustner:
Graphical User Interface for Medical Deep Learning - Application to Magnetic Resonance Imaging. APSIPA 2018: 838-847 - [c6]Thomas Kustner, Marvin Jandt, Annika Liebgott, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Sergios Gatidis, Fritz Schick, Bin Yang:
Automatic Motion Artifact Detection for Whole-Body Magnetic Resonance Imaging. ICASSP 2018: 995-999 - [c5]Thomas Küstner, Sarah Müller, Marc Fischer, Jakob Weiß, Konstantin Nikolaou, Fabian Bamberg, Bin Yang, Fritz Schick, Sergios Gatidis:
Semantic Organ Segmentation in 3D Whole-Body MR Images. ICIP 2018: 3498-3502 - 2017
- [c4]Thomas Kustner, Philip Wolf, Martin Schwartz, Annika Liebgott, Fritz Schick, Sergios Gatidis, Bin Yang:
An easy-to-use image labeling platform for automatic magnetic resonance image quality assessment. ISBI 2017: 754-757 - 2016
- [c3]Annika Liebgott, Thomas Kustner, Sergios Gatidis, Fritz Schick, Bin Yang:
Active learning for magnetic resonance image quality assessment. ICASSP 2016: 922-926 - [c2]Christopher Gilliam, Thomas Kustner, Thierry Blu:
3D motion flow estimation using local all-pass filters. ISBI 2016: 282-285 - 2015
- [c1]Thomas Kustner, Christian Würslin, Holger Schmidt, Bin Yang:
Combining Compressed Sensing with motion correction in acquisition and reconstruction for PET/MR. ICASSP 2015: 788-792
Informal and Other Publications
- 2024
- [i19]Aya Ghoul, Jiazhen Pan, Andreas Lingg, Jens Kübler, Patrick Krumm, Kerstin Hammernik, Daniel Rueckert, Sergios Gatidis, Thomas Küstner:
Attention-aware non-rigid image registration for accelerated MR imaging. CoRR abs/2404.17621 (2024) - [i18]Tugba Akinci D'Antonoli, Lucas K. Berger, Ashraya K. Indrakanti, Nathan Vishwanathan, Jakob Weiß, Matthias Jung, Zeynep Berkarda, Alexander Rau, Marco Reisert, Thomas Küstner, Alexandra Walter, Elmar M. Merkle, Martin Segeroth, Joshy Cyriac, Shan Yang, Jakob Wasserthal:
TotalSegmentator MRI: Sequence-Independent Segmentation of 59 Anatomical Structures in MR images. CoRR abs/2405.19492 (2024) - [i17]Siying Xu, Kerstin Hammernik, Andreas Lingg, Jens Kübler, Patrick Krumm, Daniel Rueckert, Sergios Gatidis, Thomas Küstner:
Attention Incorporated Network for Sharing Low-rank, Image and K-space Information during MR Image Reconstruction to Achieve Single Breath-hold Cardiac Cine Imaging. CoRR abs/2407.03034 (2024) - [i16]Sarah Müller, Louisa Fay, Lisa M. Koch, Sergios Gatidis, Thomas Küstner, Philipp Berens:
Benchmarking Dependence Measures to Prevent Shortcut Learning in Medical Imaging. CoRR abs/2407.18792 (2024) - 2023
- [i15]Jiazhen Pan, Wenqi Huang, Daniel Rueckert, Thomas Küstner, Kerstin Hammernik:
Reconstruction-driven motion estimation for motion-compensated MR CINE imaging. CoRR abs/2302.02504 (2023) - [i14]Jiazhen Pan, Suprosanna Shit, Özgün Turgut, Wenqi Huang, Hongwei Bran Li, Nil Stolt Ansó, Thomas Küstner, Kerstin Hammernik, Daniel Rueckert:
Global k-Space Interpolation for Dynamic MRI Reconstruction using Masked Image Modeling. CoRR abs/2307.12672 (2023) - [i13]Paul Fischer, Thomas Küstner, Christian F. Baumgartner:
Uncertainty Estimation and Propagation in Accelerated MRI Reconstruction. CoRR abs/2308.02631 (2023) - [i12]Jianning Li, Antonio Pepe, Christina Gsaxner, Gijs Luijten, Yuan Jin, Narmada Ambigapathy, Enrico Nasca, Naida Solak, Gian Marco Melito, Afaque R. Memon, Xiaojun Chen, Jan Stefan Kirschke, Ezequiel de la Rosa, Patrick Ferdinand Christ, Hongwei Bran Li, David G. Ellis, Michele R. Aizenberg, Sergios Gatidis, Thomas Küstner, Nadya Shusharina, Nicholas Heller, Vincent Andrearczyk, Adrien Depeursinge, Mathieu Hatt, Anjany Sekuboyina, Maximilian Löffler, Hans Liebl, Reuben Dorent, Tom Vercauteren, Jonathan Shapey, Aaron Kujawa, Stefan Cornelissen, Patrick Langenhuizen, Achraf Ben-Hamadou, Ahmed Rekik, Sergi Pujades, Edmond Boyer, Federico Bolelli, Costantino Grana, Luca Lumetti, Hamidreza Salehi, Jun Ma, Yao Zhang, Ramtin Gharleghi, Susann Beier, Arcot Sowmya, Eduardo A. Garza-Villarreal, Thania Balducci, et al.:
MedShapeNet - A Large-Scale Dataset of 3D Medical Shapes for Computer Vision. CoRR abs/2308.16139 (2023) - 2022
- [i11]Kerstin Hammernik, Thomas Küstner, Burhaneddin Yaman, Zhengnan Huang, Daniel Rueckert, Florian Knoll, Mehmet Akçakaya:
Physics-Driven Deep Learning for Computational Magnetic Resonance Imaging. CoRR abs/2203.12215 (2022) - [i10]Jiazhen Pan, Daniel Rueckert, Thomas Küstner, Kerstin Hammernik:
Learning-based and unrolled motion-compensated reconstruction for cardiac MR CINE imaging. CoRR abs/2209.03671 (2022) - 2021
- [i9]Thomas Küstner, Jiazhen Pan, Haikun Qi, Gastão Cruz, Christopher Gilliam, Thierry Blu, Bin Yang, Sergios Gatidis, René M. Botnar, Claudia Prieto:
LAPNet: Non-rigid Registration derived in k-space for Magnetic Resonance Imaging. CoRR abs/2107.09060 (2021) - 2020
- [i8]Thomas Küstner, Tobias Hepp, Marc Fischer, Martin Schwartz, Andreas Fritsche, Hans-Ulrich Häring, Konstantin Nikolaou, Fabian Bamberg, Bin Yang, Fritz Schick, Sergios Gatidis, Jürgen Machann:
Fully Automated and Standardized Segmentation of Adipose Tissue Compartments by Deep Learning in Three-dimensional Whole-body MRI of Epidemiological Cohort Studies. CoRR abs/2008.02251 (2020) - [i7]Karim Armanious, Sherif Abdulatif, Wenbin Shi, Shashank Salian, Thomas Küstner, Daniel Weiskopf, Tobias Hepp, Sergios Gatidis, Bin Yang:
Age-Net: An MRI-Based Iterative Framework for Biological Age Estimation. CoRR abs/2009.10765 (2020) - 2019
- [i6]Karim Armanious, Chenming Jiang, Sherif Abdulatif, Thomas Küstner, Sergios Gatidis, Bin Yang:
Unsupervised Medical Image Translation Using Cycle-MedGAN. CoRR abs/1903.03374 (2019) - [i5]Karim Armanious, Aastha Tanwar, Sherif Abdulatif, Thomas Küstner, Sergios Gatidis, Bin Yang:
Unsupervised Adversarial Correction of Rigid MR Motion Artifacts. CoRR abs/1910.05597 (2019) - [i4]Karim Armanious, Sherif Abdulatif, Anish Rao Bhaktharaguttu, Thomas Küstner, Tobias Hepp, Sergios Gatidis, Bin Yang:
Organ-based Age Estimation based on 3D MRI Scans. CoRR abs/1910.06271 (2019) - 2018
- [i3]Karim Armanious, Chenming Yang, Marc Fischer, Thomas Küstner, Konstantin Nikolaou, Sergios Gatidis, Bin Yang:
MedGAN: Medical Image Translation using GANs. CoRR abs/1806.06397 (2018) - [i2]Thomas Küstner, Sergios Gatidis, Annika Liebgott, Martin Schwartz, Lukas Mauch, Petros Martirosian, Holger Schmidt, Nina F. Schwenzer, Konstantin Nikolaou, Fabian Bamberg, Bin Yang, Fritz Schick:
A Machine-learning framework for automatic reference-free quality assessment in MRI. CoRR abs/1806.09602 (2018) - [i1]Karim Armanious, Thomas Küstner, Konstantin Nikolaou, Sergios Gatidis, Bin Yang:
Retrospective correction of Rigid and Non-Rigid MR motion artifacts using GANs. CoRR abs/1809.06276 (2018)
Coauthor Index
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