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2020 – today
- 2022
[j18]David S. Wishart
, Anchi Guo, Eponine Oler, Fei Wang, Afia Anjum, Harrison Peters, Raynard Dizon, Zinat Sayeeda, Siyang Tian, Brian L. Lee, Mark V. Berjanskii, Robert Mah, Mai Yamamoto, Juan Jovel, Claudia Torres-Calzada, Mickel Hiebert-Giesbrecht, Vicki W. Lui, Dorna Varshavi, Dorsa Varshavi, Dana Allen, David Arndt, Nitya Khetarpal, Aadhavya Sivakumaran, Karxena Harford, Selena Sanford, Kristen Yee, Xuan Cao, Zachary Budinski, Jaanus Liigand, Lun Zhang, Jiamin Zheng, Rupasri Mandal, Naama Karu, Maija Dambrova, Helgi B. Schiöth, Russell Greiner, Vasuk Gautam:
HMDB 5.0: the Human Metabolome Database for 2022. Nucleic Acids Res. 50(D1): 622-631 (2022)
2010 – 2019
- 2019
- [j17]David Arndt, Ana Marcu, Yongjie Liang, David S. Wishart:
PHAST, PHASTER and PHASTEST: Tools for finding prophage in bacterial genomes. Briefings Bioinform. 20(4): 1560-1567 (2019) - 2018
- [j16]David S. Wishart, Yannick Djoumbou Feunang, Ana Marcu, An Chi Guo, Kevin Y. H. Liang, Rosa Vázquez-Fresno, Tanvir Sajed, Daniel Johnson, Carin Li, Naama Karu, Zinat Sayeeda, Elvis J. Lo, Nazanin Assempour, Mark V. Berjanskii, Sandeep Singhal, David Arndt, Yongjie Liang, Hasan Badran, Jason R. Grant, Arnau Serra-Cayuela, Yifeng Liu, Rupa Mandal, Vanessa Neveu, Allison Pon, Craig Knox, Michael Wilson, Claudine Manach, Augustin Scalbert:
HMDB 4.0: the human metabolome database for 2018. Nucleic Acids Res. 46(Database-Issue): D608-D617 (2018) - 2017
- [j15]Miguel Ramirez-Gaona, Ana Marcu, Allison Pon, An Chi Guo, Tanvir Sajed, Noah A. Wishart, Naama Karu, Yannick Djoumbou Feunang, David Arndt, David S. Wishart:
YMDB 2.0: a significantly expanded version of the yeast metabolome database. Nucleic Acids Res. 45(Database-Issue): D440-D445 (2017) - 2016
- [j14]Sasha Babicki, David Arndt, Ana Marcu, Yongjie Liang, Jason R. Grant, Adam Maciejewski, David S. Wishart:
Heatmapper: web-enabled heat mapping for all. Nucleic Acids Res. 44(Webserver-Issue): W147-W153 (2016) - [j13]David Arndt, Jason R. Grant, Ana Marcu, Tanvir Sajed, Allison Pon, Yongjie Liang, David S. Wishart:
PHASTER: a better, faster version of the PHAST phage search tool. Nucleic Acids Res. 44(Webserver-Issue): W16-W21 (2016) - 2015
- [j12]David S. Wishart, David Arndt, Allison Pon, Tanvir Sajed, Anchi Guo, Yannick Djoumbou, Craig Knox, Michael Wilson, Yongjie Liang, Jason R. Grant, Yifeng Liu, Seyed Ali Goldansaz, Stephen M. Rappaport:
T3DB: the toxic exposome database. Nucleic Acids Res. 43(Database-Issue): 928-934 (2015) - [j11]Noor E. Hafsa, David Arndt, David S. Wishart:
CSI 3.0: a web server for identifying secondary and super-secondary structure in proteins using NMR chemical shifts. Nucleic Acids Res. 43(Webserver-Issue): W370-W377 (2015) - 2014
- [j10]Timothy Jewison, Yilu Su, Fatemeh Miri Disfany, Yongjie Liang, Craig Knox, Adam Maciejewski, Jenna Poelzer, Jessica Huynh, You Zhou, David Arndt, Yannick Djoumbou, Yifeng Liu, Lu Deng, Anchi Guo, Beomsoo Han, Allison Pon, Michael Wilson, Shahrzad Rafatnia, Philip Liu, David S. Wishart:
SMPDB 2.0: Big Improvements to the Small Molecule Pathway Database. Nucleic Acids Res. 42(Database-Issue): 478-484 (2014) - [j9]Vivian Law, Craig Knox, Yannick Djoumbou, Timothy Jewison, Anchi Guo, Yifeng Liu, Adam Maciejewski, David Arndt, Michael Wilson, Vanessa Neveu, Alexandra Tang, Geraldine Gabriel, Carol Ly, Sakina Adamjee, Zerihun T. Dame, Beomsoo Han, You Zhou, David S. Wishart:
DrugBank 4.0: shedding new light on drug metabolism. Nucleic Acids Res. 42(Database-Issue): 1091-1097 (2014) - 2013
- [j8]David S. Wishart, Timothy Jewison, Anchi Guo, Michael Wilson, Craig Knox, Yifeng Liu, Yannick Djoumbou, Rupasri Mandal, Farid Aziat, Edison Dong, Souhaila Bouatra, Igor Sinelnikov, David Arndt, Jianguo Xia, Philip Liu, Faizath Yallou, Trent C. Bjorndahl, Rolando Perez-Pineiro, Roman Eisner, Felicity Allen, Vanessa Neveu, Russell Greiner, Augustin Scalbert:
HMDB 3.0 - The Human Metabolome Database in 2013. Nucleic Acids Res. 41(Database-Issue): 801-807 (2013) - 2012
- [j7]David Arndt, Jianguo Xia, Yifeng Liu, You Zhou, Anchi Guo, Joseph A. Cruz, Igor Sinelnikov, Karen Budwill, Camilla L. Nesbø, David S. Wishart:
METAGENassist: a comprehensive web server for comparative metagenomics. Nucleic Acids Res. 40(Web-Server-Issue): 88-95 (2012)
2000 – 2009
- 2008
- [j6]Yi Shi, Jianjun Zhou, David Arndt, David S. Wishart, Guohui Lin:
Protein contact order prediction from primary sequences. BMC Bioinform. 9 (2008) - [j5]David S. Wishart, David Arndt, Mark V. Berjanskii, Anchi Guo, Yi Shi, Savita Shrivastava, Jianjun Zhou, You Zhou, Guohui Lin:
PPT-DB: the protein property prediction and testing database. Nucleic Acids Res. 36(Database-Issue): 222-229 (2008) - [j4]Scott Montgomerie, Joseph A. Cruz, Savita Shrivastava, David Arndt, Mark V. Berjanskii, David S. Wishart:
PROTEUS2: a web server for comprehensive protein structure prediction and structure-based annotation. Nucleic Acids Res. 36(Web-Server-Issue): 202-209 (2008) - [j3]David S. Wishart, David Arndt, Mark V. Berjanskii, Peter Tang, Jianjun Zhou, Guohui Lin:
CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data. Nucleic Acids Res. 36(Web-Server-Issue): 496-502 (2008) - 2007
- [j2]David S. Wishart, Dan Tzur, Craig Knox, Roman Eisner, Anchi Guo, Nelson Young, Dean Cheng, Kevin Jewell, David Arndt, Summit Sawhney, Chris Fung, Lisa Nikolai, Mike Lewis, Marie-Aude Coutouly, Ian J. Forsythe, Peter Tang, Savita Shrivastava, Kevin Jeroncic, Paul Stothard, Godwin Amegbey, David Block, David D. Hau, James Wagner, Jessica Miniaci, Melisa Clements, Mulu Gebremedhin, Natalie Guo, Ying Zhang, Gavin E. Duggan, Glen D. MacInnis, Alim M. Weljie, Reza Dowlatabadi, Fiona Bamforth, Derrick Clive, Russell Greiner, Liang Li, Tom Marrie, Brian D. Sykes, Hans J. Vogel, Lori Querengesser:
HMDB: the Human Metabolome Database. Nucleic Acids Res. 35(Database-Issue): 521-526 (2007) - 2004
- [j1]David S. Wishart, Robert Yang, David Arndt, Peter Tang, Joseph A. Cruz:
Dynamic cellular automata: a simple but powerful approach to cellular simulation. Silico Biol. 5(2): 139-161 (2004)
Coauthor Index
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