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Books and Theses
- 2010
[b1]Joshua Cates:
Shape Modeling and Analysis with Entropy-Based Particle Systems. University of Utah, USA, 2010
Journal Articles
- 2016
- [j5]Ipek Oguz, Joshua E. Cates
, Manasi Datar, Beatriz Paniagua, P. Thomas Fletcher, Clement Vachet, Martin Styner, Ross T. Whitaker:
Entropy-based particle correspondence for shape populations. Int. J. Comput. Assist. Radiol. Surg. 11(7): 1221-1232 (2016) - 2015
- [j4]Yi Gao, Liangjia Zhu, Joshua Cates, Rob S. MacLeod, Sylvain Bouix, Allen R. Tannenbaum:
A Kalman Filtering Perspective for Multiatlas Segmentation. SIAM J. Imaging Sci. 8(2): 1007-1029 (2015) - 2005
- [j3]Joshua E. Cates, Ross T. Whitaker, Greg M. Jones:
Case study: an evaluation of user-assisted hierarchical watershed segmentation. Medical Image Anal. 9(6): 566-578 (2005) - 2004
- [j2]Joshua E. Cates, Aaron E. Lefohn, Ross T. Whitaker:
GIST: an interactive, GPU-based level set segmentation tool for 3D medical images. Medical Image Anal. 8(3): 217-231 (2004) - 2002
- [j1]Jens Gregor, Shaun S. Gleason, Michael J. Paulus, Joshua Cates:
Fast Feldkamp reconstruction based on focus of attention and distributed computing. Int. J. Imaging Syst. Technol. 12(6): 229-234 (2002)
Conference and Workshop Papers
- 2020
- [c22]Alan Morris, Eugene G. Kholmovski, Nassir Marrouche, Joshua Cates, Shireen Y. Elhabian:
An Image-based Approach for 3D Left Atrium Functional Measurements. CinC 2020: 1-4 - 2019
- [c21]Riddhish Bhalodia, Archanasri Subramanian, Alan Morris, Joshua Cates, Ross T. Whitaker, Evgueni Kholmovski, Nassir Marrouche, Shireen Y. Elhabian:
Does Alignment in Statistical Shape Modeling of Left Atrium Appendage Impact Stroke Prediction? CinC 2019: 1-4 - [c20]Anupama Goparaju, Alan Morris, Ibolya Csecs, Riddhish Bhalodia, Tom Ditter, Kristine Fuimaono, Evgueni Kholmovski, Nassir Marrouche, Joshua Cates, Shireen Y. Elhabian:
Interatrial Septum and Appendage Ostium in Atrial Fibrillation Patients: A Population Study. CinC 2019: 1-3 - [c19]Shalin Parikh, Anupama Goparaju, Riddhish Bhalodia, Bosten Loveless, Alan Morris, Joshua Cates, Evgueni Kholmovski, Nassir Marrouche, Shireen Y. Elhabian:
Efficient Segmentation Pipeline Using Diffeomorphic Image Registration: A Validation Study. CinC 2019: 1-4 - 2018
- [c18]Riddhish Bhalodia, Anupama Goparaju, Tim Sodergren, Ross T. Whitaker, Alan Morris, Evgueni Kholmovski, Nassir Marrouche, Joshua Cates, Shireen Y. Elhabian:
Deep Learning for End-to-End Atrial Fibrillation Recurrence Estimation. CinC 2018: 1-4 - [c17]Tim Sodergren, Anupama Goparaju, Alan Morris, Evgueni Kholmovski, Nassir Marrouche, Joshua Cates, Shireen Y. Elhabian:
Interactive Exploration of Left Atrium Population-Level Morphology in Atrial Fibrillation Patients. CinC 2018: 1-3 - [c16]Tim Sodergren, Riddhish Bhalodia, Ross T. Whitaker, Joshua Cates, Nassir Marrouche, Shireen Y. Elhabian:
Mixture Modeling of Global Shape Priors and Autoencoding Local Intensity Priors for Left Atrium Segmentation. STACOM@MICCAI 2018: 357-367 - 2015
- [c15]Rabia Haq, Joshua Cates, David A. Besachio, Roderick C. Borgie, Michel A. Audette:
Statistical Shape Model Construction of Lumbar Vertebrae and Intervertebral Discs in Segmentation for Discectomy Surgery Simulation. CSI@MICCAI 2015: 85-96 - 2014
- [c14]Brian Zenger, Joshua Cates, Alan Morris, Eugene G. Kholmovski, Alexander Au, Ravi Ranjan, Nazem Akoum, Christopher McGann, Brent Wilson, Nassir Marrouche, Frederick T. Han, Rob S. MacLeod:
A Practical Algorithm for Improving Localization and Quantification of Left Ventricular Scar. CinC 2014: 105-108 - 2013
- [c13]Gregory Gardner, Alan Morris, Koji Higuchi, Rob S. MacLeod, Joshua Cates:
A point-correspondence approach to describing the distribution of image features on anatomical surfaces, with application to atrial fibrillation. ISBI 2013: 226-229 - [c12]Manasi Datar, Ilwoo Lyu, Sun Hyung Kim, Joshua E. Cates, Martin Andreas Styner, Ross T. Whitaker:
Geodesic Distances to Landmarks for Dense Correspondence on Ensembles of Complex Shapes. MICCAI (2) 2013: 19-26 - 2012
- [c11]Liangjia Zhu, Yi Gao, Anthony J. Yezzi, Robert S. MacLeod, Joshua Cates, Allen R. Tannenbaum:
Automatic segmentation of the left atrium from MRI images using salient feature and contour evolution. EMBC 2012: 3211-3214 - [c10]Daniel Perry, Alan Morris, Nathan Burgon, Christopher McGann, Robert S. MacLeod, Joshua Cates:
Automatic classification of scar tissue in late gadolinium enhancement cardiac MRI for the assessment of left-atrial wall injury after radiofrequency ablation. Computer-Aided Diagnosis 2012: 83151D - 2011
- [c9]Clement Vachet, Heather Cody Hazlett, Marc Niethammer, Ipek Oguz, Joshua E. Cates, Ross T. Whitaker, Joseph Piven, Martin Styner:
Group-wise automatic mesh-based analysis of cortical thickness. Image Processing 2011: 796227 - 2009
- [c8]Ipek Oguz, Marc Niethammer, Joshua E. Cates, Ross T. Whitaker, P. Thomas Fletcher, Clement Vachet, Martin Styner:
Cortical Correspondence with Probabilistic Fiber Connectivity. IPMI 2009: 651-663 - [c7]Manasi Datar, Joshua E. Cates, P. Thomas Fletcher, Sylvain Gouttard, Guido Gerig, Ross T. Whitaker:
Particle Based Shape Regression of Open Surfaces with Applications to Developmental Neuroimaging. MICCAI (1) 2009: 167-174 - 2008
- [c6]Joshua E. Cates, P. Thomas Fletcher, Zachary Warnock, Ross T. Whitaker:
A shape analysis framework for small animal phenotyping with application to mice with a targeted disruption of Hoxd11. ISBI 2008: 512-515 - [c5]Ipek Oguz, Joshua E. Cates, P. Thomas Fletcher, Ross T. Whitaker, Derek Cool, Stephen R. Aylward, Martin Andreas Styner:
Cortical correspondence using entropy-based particle systems and local features. ISBI 2008: 1637-1640 - [c4]Joshua E. Cates, P. Thomas Fletcher, Martin Styner, Heather Cody Hazlett, Ross T. Whitaker:
Particle-Based Shape Analysis of Multi-object Complexes. MICCAI (1) 2008: 477-485 - 2007
- [c3]Joshua E. Cates, P. Thomas Fletcher, Martin Andreas Styner, Martha Elizabeth Shenton, Ross T. Whitaker:
Shape Modeling and Analysis with Entropy-Based Particle Systems. IPMI 2007: 333-345 - 2006
- [c2]Joshua E. Cates, David M. Weinstein, McKay Davis:
The Center for Integrative Biomedical Computing: advancing biomedical science with open source. ISBI 2006: 694-697 - 2003
- [c1]Aaron E. Lefohn, Joshua E. Cates, Ross T. Whitaker:
Interactive, GPU-Based Level Sets for 3D Segmentation. MICCAI (1) 2003: 564-572
Informal and Other Publications
- 2019
- [i2]Tim Sodergren, Riddhish Bhalodia, Ross T. Whitaker, Joshua Cates, Nassir Marrouche, Shireen Y. Elhabian:
Mixture Modeling of Global Shape Priors and Autoencoding Local Intensity Priors for Left Atrium Segmentation. CoRR abs/1903.06260 (2019) - 2018
- [i1]Riddhish Bhalodia, Anupama Goparaju, Tim Sodergren, Alan Morris, Evgueni Kholmovski, Nassir Marrouche, Joshua Cates, Ross T. Whitaker, Shireen Y. Elhabian:
Deep Learning for End-to-End Atrial Fibrillation Recurrence Estimation. CoRR abs/1810.00475 (2018)
Coauthor Index
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