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2020 – today
- 2021
[j10]Dropen Sheka, Nikolay Alabi, Paul M. K. Gordon
:
Oxford nanopore sequencing in clinical microbiology and infection diagnostics. Briefings Bioinform. 22(5) (2021)- [j9]Michael R. Smith, Rachel Chan, Maaz Khurram, Paul M. K. Gordon:
Evaluating the effectiveness of ensemble voting in improving the accuracy of consensus signals produced by various DTWA algorithms from step-current signals generated during nanopore sequencing. PLoS Comput. Biol. 17(9) (2021)
2010 – 2019
- 2014
- [j8]Ian Reid, Nicholas O'Toole, Omar Zabaneh, Reza Nourzadeh, Mahmoud Dahdouli, Mostafa Abdellateef, Paul M. K. Gordon, Jung Soh, Gregory Butler, Christoph W. Sensen, Adrian Tsang:
SnowyOwl: accurate prediction of fungal genes by using RNA-Seq and homology information to select among ab initio models. BMC Bioinform. 15: 229 (2014) - 2011
- [j7]Toshiaki Katayama, Mark D. Wilkinson, Rutger A. Vos, Takeshi Kawashima, Shuichi Kawashima, Mitsuteru Nakao, Yasunori Yamamoto, Hong-Woo Chun, Atsuko Yamaguchi, Shin Kawano, Jan Aerts, Kiyoko F. Aoki-Kinoshita, Kazuharu Arakawa, Bruno Aranda, Raoul Jean Pierre Bonnal, José María Fernández, Takatomo Fujisawa, Paul M. K. Gordon, Naohisa Goto, Syed Haider, Todd W. Harris, Takashi Hatakeyama, Isaac Ho, Masumi Itoh, Arek Kasprzyk, Nobuhiro Kido, Young-Joo Kim, Akira R. Kinjo, Fumikazu Konishi, Yulia Kovarskaya, Gregory Von Kuster, Alberto Labarga, Vachiranee Limviphuvadh, E. Luke McCarthy, Yasukazu Nakamura, Yunsun Nam, Kozo Nishida, Kunihiro Nishimura, Tatsuya Nishizawa, Soichi Ogishima, Tom Oinn, Shinobu Okamoto, Shujiro Okuda, Keiichiro Ono, Kazuki Oshita, Keun-Joon Park, Nicholas H. Putnam, Martin Senger, Jessica Severin, Yasumasa Shigemoto, Hideaki Sugawara, James Taylor, Oswaldo Trelles, Chisato Yamasaki, Riu Yamashita, Noriyuki Satoh, Toshihisa Takagi:
The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications. J. Biomed. Semant. 2: 4 (2011) - 2010
- [j6]Toshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita, Yasunori Yamamoto, Atsuko Yamaguchi, Shuichi Kawashima, Hong-Woo Chun, Jan Aerts, Bruno Aranda, Lord H. Barboza, Raoul Jean Pierre Bonnal, Richard M. Bruskiewich, Jan Christian Bryne, José María Fernández, Akira Funahashi, Paul M. K. Gordon, Naohisa Goto, Andreas Groscurth, Alex Gutteridge, Richard C. G. Holland, Yoshinobu Kano, Edward A. Kawas, Arnaud Kerhornou, Eri Kibukawa, Akira R. Kinjo, Michael Kuhn, Hilmar Lapp, Heikki Lehväslaiho, Hiroyuki Nakamura, Yasukazu Nakamura, Tatsuya Nishizawa, Chikashi Nobata, Tamotsu Noguchi, Thomas M. Oinn, Shinobu Okamoto, Stuart Owen, Evangelos Pafilis, Matthew R. Pocock, Pjotr Prins, René Ranzinger, Florian Reisinger, Lukasz Salwínski, Mark J. Schreiber, Martin Senger, Yasumasa Shigemoto, Daron M. Standley, Hideaki Sugawara, Toshiyuki Tashiro, Oswaldo Trelles, Rutger A. Vos, Mark D. Wilkinson, William S. York, Christian M. Zmasek, Kiyoshi Asai, Toshihisa Takagi:
The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. J. Biomed. Semant. 1: 8 (2010) - [c7]Paul M. K. Gordon, Ken Barker, Christoph W. Sensen:
Helping Biologists Effectively Build Workflows, without Programming. DILS 2010: 74-89 - [c6]Paul M. K. Gordon, Ken Barker, Christoph W. Sensen:
Programming-by-Example Meets the Semantic Web: Using Ontologies and Web Services to Close the Semantic Gap. VL/HCC 2010: 133-140
2000 – 2009
- 2008
- [j5]Jung Soh, Paul M. K. Gordon, Morgan L. Taschuk, Anguo Dong, Andrew C. Ah-Seng, Andrei L. Turinsky, Christoph W. Sensen:
Bluejay 1.0: genome browsing and comparison with rich customization provision and dynamic resource linking. BMC Bioinform. 9 (2008) - [c5]Paul M. K. Gordon, Christoph W. Sensen:
Creating Bioinformatics Semantic Web Services from Existing Web Services: A Real-World Application of SAWSDL. ICWS 2008: 608-614 - 2007
- [j4]Paul M. K. Gordon, Quang Trinh, Christoph W. Sensen:
Semantic Web Service provision: a realistic framework for Bioinformatics programmers. Bioinform. 23(9): 1178-1180 (2007) - [j3]Paul M. K. Gordon, Christoph W. Sensen:
Seahawk: moving beyond HTML in Web-based bioinformatics analysis. BMC Bioinform. 8 (2007) - [c4]Jung Soh, Paul M. K. Gordon, Andrew C. Ah-Seng, Andrei L. Turinsky, Morgan L. Taschuk, Krzysztof Borowski, Christoph W. Sensen:
Bluejay: A Highly Scalable and Integrative Visual Environment for Genome Exploration. IEEE SCW 2007: 92-98 - [c3]Paul M. K. Gordon, Edward A. Kawas, Mark D. Wilkinson, Christoph W. Sensen:
Using a Novel Data Transformation Technique to Provide the EMBOSS Software Suite as Semantic Web Services. BIBM 2007: 117-124 - 2006
- [c2]Chunyan Wang, Paul M. K. Gordon, Andrei L. Turinsky, Jason Burgess, Terry Dalton, Christoph W. Sensen:
Combining a High-Throughput Bioinformatics Grid and Bioinformatics Web Services. GCCB 2006: 1-10 - [c1]Anguo Dong, Andrei L. Turinsky, Andrew C. Ah-Seng, Morgan L. Taschuk, Paul M. K. Gordon, Katharina Hochauer, Sabrina Fröls, Jung Soh, Christoph W. Sensen:
Enhancing Bluejay with Scalability, Genome Comparison and Microarray Visualization. GfKl 2006: 557-568 - 2005
- [j2]Julie N. Stromer, Gerald T. Quon, Paul M. K. Gordon, Andrei L. Turinsky, Christoph W. Sensen:
Jabiru: Harnessing Java 3D Behaviors for Device and Display Portability. IEEE Computer Graphics and Applications 25(2): 70-80 (2005) - 2004
- [j1]Andrei L. Turinsky, Andrew C. Ah-Seng, Paul M. K. Gordon, Julie N. Stromer, Morgan L. Taschuk, Emily W. Xu, Christoph W. Sensen:
Bioinformatics visualization and integration with open standards: the Bluejay genomic browser. Silico Biol. 5(2): 187-198 (2004) - 2002
- [p1]Paul M. K. Gordon, Terry Gaasterland, Christoph W. Sensen:
Bioinformatics: Genomic Data Representation through Images - MAGPIE as an Example. Essentials of Genomics and Bioinformatics 2002: 345-363
Coauthor Index
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