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Books and Theses
- 2017
[b2]Luca Marchetti, Corrado Priami, Vo Hong Thanh:
Simulation Algorithms for Computational Systems Biology. Texts in Theoretical Computer Science. An EATCS Series, Springer 2017, ISBN 978-3-319-63111-0, pp. 1-205- 2013
- [b1]Vo Hong Thanh:
On Efficient Algorithms for Stochastic Simulation of Biochemical Reaction Systems. University of Trento, Italy, 2013
Journal Articles
- 2021
- [j7]Vo Hong Thanh
, Dani Korpela, Pekka Orponen:
Cotranscriptional Kinetic Folding of RNA Secondary Structures Including Pseudoknots. J. Comput. Biol. 28(9): 892-908 (2021) - 2020
- [j6]Giulia Simoni, Vo Hong Thanh, Corrado Priami, Luca Marchetti:
A comparison of deterministic and stochastic approaches for sensitivity analysis in computational systems biology. Briefings Bioinform. 21(2): 527-540 (2020) - [j5]Vo Hong Thanh:
RSSALib: a library for stochastic simulation of complex biochemical reactions. Bioinform. 36(18): 4825-4826 (2020) - 2019
- [j4]Vo Hong Thanh, Roberto Zunino, Corrado Priami:
Efficient formulation of the rejection-based algorithm for biochemical reactions with delays. Int. J. Bioinform. Res. Appl. 15(2): 159-173 (2019) - 2017
- [j3]Vo Hong Thanh, Roberto Zunino, Corrado Priami:
Efficient Constant-Time Complexity Algorithm for Stochastic Simulation of Large Reaction Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 14(3): 657-667 (2017) - 2016
- [j2]Luca Marchetti, Corrado Priami, Vo Hong Thanh:
HRSSA - Efficient hybrid stochastic simulation for spatially homogeneous biochemical reaction networks. J. Comput. Phys. 317: 301-317 (2016) - 2014
- [j1]Vo Hong Thanh, Roberto Zunino:
Adaptive tree-based search for stochastic simulation algorithm. Int. J. Comput. Biol. Drug Des. 7(4): 341-357 (2014)
Conference and Workshop Papers
- 2013
- [c2]Vo Hong Thanh, Roberto Zunino:
Splitting for rare event simulation in biochemical systems. SimuTools 2013: 109-118 - 2012
- [c1]Vo Hong Thanh, Roberto Zunino:
Tree-based search for stochastic simulation algorithm. SAC 2012: 1415-1416
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