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2020 – today
- 2022
[i1]Anastasiya Belyaeva, Joel Shor, Daniel E. Cook, Kishwar Shafin, Daniel Liu, Armin Töpfer, Aaron M. Wenger, William J. Rowell, Howard Yang, Alexey Kolesnikov, Cory Y. McLean, Maria Nattestad, Andrew Carroll, Pi-Chuan Chang:
Knowledge distillation for fast and accurate DNA sequence correction. CoRR abs/2211.09862 (2022)
2010 – 2019
- 2014
- [j4]Manja Marz
, Niko Beerenwinkel, Christian Drosten, Markus Fricke, Dmitrij Frishman, Ivo L. Hofacker, Dieter Hoffmann, Martin Middendorf, Thomas Rattei, Peter F. Stadler, Armin Töpfer:
Challenges in RNA virus bioinformatics. Bioinform. 30(13): 1793-1799 (2014) - [j3]Armin Töpfer, Tobias Marschall, Rowena A. Bull, Fabio Luciani, Alexander Schönhuth, Niko Beerenwinkel:
Viral Quasispecies Assembly via Maximal Clique Enumeration. PLoS Comput. Biol. 10(3) (2014) - [c4]Armin Töpfer, Niko Beerenwinkel:
Viral quasispecies assembly from paired-end reads. ICCABS 2014: 1 - [c3]Armin Töpfer, Tobias Marschall, Rowena A. Bull, Fabio Luciani, Alexander Schönhuth, Niko Beerenwinkel:
Viral Quasispecies Assembly via Maximal Clique Enumeration. RECOMB 2014: 309-310 - 2013
- [j2]Armin Töpfer, Osvaldo Zagordi, Sandhya Prabhakaran, Volker Roth, Eran Halperin, Niko Beerenwinkel:
Probabilistic Inference of Viral Quasispecies Subject to Recombination. J. Comput. Biol. 20(2): 113-123 (2013) - [c2]Armin Töpfer, Francesca Di Giallonardo, Karin J. Metzner, Huldrych F. Günthard, Niko Beerenwinkel:
Probing of viral diversity by global haplotype prediction. ICCABS 2013: 1 - 2012
- [c1]Osvaldo Zagordi, Armin Töpfer, Sandhya Prabhakaran, Volker Roth, Eran Halperin, Niko Beerenwinkel:
Probabilistic Inference of Viral Quasispecies Subject to Recombination. RECOMB 2012: 342-354 - 2010
- [j1]Matús Kalas, Pål Puntervoll, Alexandre Joseph, Edita Bartaseviciute, Armin Töpfer, Prabakar Venkataraman, Steve Pettifer, Jan Christian Bryne, Jon C. Ison, Christophe Blanchet, Kristoffer Rapacki, Inge Jonassen:
BioXSD: the common data-exchange format for everyday bioinformatics web services. Bioinform. 26(18) (2010)
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