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ORCIDMohd Shahir Shamsir
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Journal Articles
- 2017
[j13]Aliyu Adamu
, Roswanira Abdul Wahab, Mohd Shahir Shamsir, Firdausi Aliyu, Fahrul Huyop:
Deciphering the catalytic amino acid residues of l-2-haloacid dehalogenase (DehL) from Rhizobium sp. RC1: An in silico analysis. Comput. Biol. Chem. 70: 125-132 (2017)- 2016
- [j12]Bashir Sajo Mienda, Mohd Shahir Shamsir, Rosli Md. Illias:
Model-guided metabolic gene knockout of gnd for enhanced succinate production in Escherichia coli from glucose and glycerol substrates. Comput. Biol. Chem. 61: 130-137 (2016) - 2015
- [j11]Soudabeh Sabetian, Mohd Shahir Shamsir:
Identification of putative drug targets for human sperm-egg interaction defect using protein network approach. BMC Syst. Biol. 9: 37 (2015) - [j10]Narjeskhatoon Habibi, Alireza Norouzi, Siti Zaiton Mohd Hashim, Mohd Shahir Shamsir, Razip Samian:
Prediction of recombinant protein overexpression in Escherichia coli using a machine learning based model (RPOLP). Comput. Biol. Medicine 66: 330-336 (2015) - 2014
- [j9]Chuii Khim Chong, Mohd Saberi Mohamad, Safaai Deris, Mohd Shahir Shamsir, Afnizanfaizal Abdullah:
An improved differential evolution algorithm for enhancing biochemical pathways simulation and production. Int. J. Data Min. Bioinform. 10(4): 424-439 (2014) - [j8]Faisal Saeed, Ali Ahmed, Mohd Shahir Shamsir, Naomie Salim:
Weighted voting-based consensus clustering for chemical structure databases. J. Comput. Aided Mol. Des. 28(6): 675-684 (2014) - [j7]Sepideh Parvizpour, Jafar Razmara, Aizi Nor Mazila Ramli, Rosli Md. Illias, Mohd Shahir Shamsir:
Structural and functional analysis of a novel psychrophilic β-mannanase from Glaciozyma antarctica PI12. J. Comput. Aided Mol. Des. 28(6): 685-698 (2014) - 2013
- [j6]Teong Han Chew, Kwee Hong Joyce-Tan, Zeti-Azura Mohamed-Hussein, Pek Iee Elizabeth-Chia, Mohd Shahir Shamsir:
Improving Molecular Dynamics Simulation Performance on Low-Cost Systems. Comput. Sci. Eng. 15(3): 64-70 (2013) - 2012
- [j5]Hamed Bostan, Naomie Salim, Zeti-Azura Mohamed-Hussein, Peter Klappa, Mohd Shahir Shamsir:
CMD: A Database to Store the Bonding States of Cysteine Motifs with Secondary Structures. Adv. Bioinformatics 2012: 849830:1-849830:5 (2012) - [j4]Chuii Khim Chong, Mohd Saberi Mohamad, Safaai Deris, Mohd Shahir Shamsir, Yee Wen Choon, Lian En Chai:
Improved Differential Evolution Algorithm for Parameter Estimation to Improve the Production of Biochemical Pathway. Int. J. Interact. Multim. Artif. Intell. 1(5): 22-29 (2012) - [j3]Aizi Nor Mazila Ramli, Nor Muhammad Mahadi, Mohd Shahir Shamsir, Amir Rabu, Kwee Hong Joyce-Tan, Abdul Munir Abdul Murad, Rosli Md. Illias:
Structural prediction of a novel chitinase from the psychrophilic Glaciozyma antarctica PI12 and an analysis of its structural properties and function. J. Comput. Aided Mol. Des. 26(8): 947-961 (2012) - 2011
- [j2]Teong Han Chew, Kwee Hong Joyce-Tan, Farizuwana Akma, Mohd Shahir Shamsir:
birgHPC: creating instant computing clusters for bioinformatics and molecular dynamics. Bioinform. 27(9): 1320-1321 (2011) - 2009
- [j1]Azura M. H. Zeti, Mohd Shahir Shamsir, Khairina Tajul-Arifin, Amir F. Merican, Rahmah Mohamed, Sheila Nathan, Nor Muhammad Mahadi, Suhaimi Napis, Tin Wee Tan:
Bioinformatics in Malaysia: Hope, Initiative, Effort, Reality, and Challenges. PLoS Comput. Biol. 5(8) (2009)
Conference and Workshop Papers
- 2013
- [c7]Nor Farhah Binti Saidin, Chuii Khim Chong, Yee Wen Choon, Lian En Chai, Safaai Deris, Rosli Md. Illias, Mohd Shahir Shamsir, Mohd Saberi Mohamad:
Using Ant Colony Optimization (ACO) on Kinetic Modeling of the Acetoin Production in Lactococcus Lactis C7. BDI 2013: 25-35 - [c6]Siew Teng Ng, Chuii Khim Chong, Yee Wen Choon, Lian En Chai, Safaai Deris, Rosli Md. Illias, Mohd Shahir Shamsir, Mohd Saberi Mohamad:
Using Particle Swarm Optimization for Estimating Kinetics Parameters on Essential Amino Acid Production of Arabidopsis Thaliana. BDI 2013: 51-61 - [c5]Chuii Khim Chong, Mohd Saberi Mohamad, Safaai Deris, Mohd Shahir Shamsir, Yee Wen Choon, Lian En Chai:
Threonine Biosynthesis Pathway Simulation Using IBMDE with Parameter Estimation. PAKDD Workshops 2013: 191-200 - 2012
- [c4]Chuii Khim Chong, Mohd Saberi Mohamad, Safaai Deris, Mohd Shahir Shamsir, Afnizanfaizal Abdullah, Yee Wen Choon, Lian En Chai, Sigeru Omatu:
Using an Improved Differential Evolution Algorithm for Parameter Estimation to Simulate Glycolysis Pathway. DCAI 2012: 709-716 - 2011
- [c3]Zafril Rizal M. Azmi, Kamalrulnizam Abu Bakar, Abdul Hanan Abdullah, Mohd Shahir Shamsir, Rahiwan Nazar Romli, Syahrizal Azmir M. D. Sharif:
Grid Jobs Scheduling Improvement Using Priority Rules and Backfilling. ICSECS (1) 2011: 401-415 - 2009
- [c2]Zafril Rizal M. Azmi, Kamalrulnizam Abu Bakar, Abdul Hanan Abdullah, Mohd Shahir Shamsir:
Distributed Computing Jobs Scheduling Improvement Using Simulated Annealing Optimizer. UKSim 2009: 461-467 - 2008
- [c1]Mohd Shahir Shamsir, Zeti-Azura Mohamed-Hussein, Johan Sharif:
Unravelling Prion Diseases Using Molecular Dynamics Simulations. Asia International Conference on Modelling and Simulation 2008: 895-900
Coauthor Index
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