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Journal Articles
- 2014
[j4]Krishna R. Kalari
, Asha A. Nair, Jaysheel D. Bhavsar, Daniel R. O'Brien, Jaime I. Dávila, Matthew A. Bockol, Jinfu J. Nie, Xiaojia Tang, Saurabh Baheti, Jay B. Doughty, Sumit Middha, Hugues Sicotte, E. Aubrey Thompson, Yan W. Asmann, Jean-Pierre A. Kocher:
MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing. BMC Bioinform. 15: 224 (2014)- [j3]Huihuang Yan, Jared Evans, Mike Kalmbach, Raymond M. Moore, Sumit Middha, Stanislav Luban, Liguo Wang, Aditya Bhagwate, Ying Li, Zhifu Sun, Xianfeng Chen, Jean-Pierre A. Kocher:
HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data. BMC Bioinform. 15: 280 (2014) - 2012
- [j2]Yan W. Asmann, Sumit Middha, Asif Hossain, Saurabh Baheti, Ying Li, High-Seng Chai, Zhifu Sun, Patrick H. Duffy, Ahmed A. Hadad, Asha A. Nair, Xiaoyu Liu, Yuji Zhang, Eric W. Klee, Krishna R. Kalari, Jean-Pierre A. Kocher:
TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data. Bioinform. 28(2): 277-278 (2012) - [j1]Zhifu Sun, Saurabh Baheti, Sumit Middha, Rahul Kanwar, Yuji Zhang, Xing Li, Andreas S. Beutler, Eric W. Klee, Yan W. Asmann, E. Aubrey Thompson, Jean-Pierre A. Kocher:
SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing. Bioinform. 28(16): 2180-2181 (2012)
Conference and Workshop Papers
- 2018
- [c1]Aijazuddin Syed, Anoop Balakrishnan, Aaron Dack, John Ziegler, Shruti H. Madur, Jack Birnbaum, Jason Hwee, Meera Prasad, Mustafa Syed, Mohammad Haque, Zhen Y. Liu, Sumit Middha, Ryan Ptashkin, Gowtham Jayakumaran, Rana Satshil, Anita Bowman, Yun-Te Lin, Angela R. Brannon, Michael F. Berger, Ahmet Zehir:
MPath - Results Manager, a comprehensive solution to store, review and manage genomic variants from NGS-based clinical tests. AMIA 2018
Coauthor Index
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