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Source Code for Biology and Medicine, Volume 11
Volume 11, Number 1, December 2016
- Jitsuki Sawamura, Shigeru Morishita, Jun Ishigooka:
Symmetrical treatment of "Diagnostic and Statistical Manual of Mental Disorders, Fifth Edition", for major depressive disorders. 1 - Vasanth R. Singan
, Jeremy C. Simpson
:
Implementation of the Rank-Weighted Co-localization (RWC) algorithm in multiple image analysis platforms for quantitative analysis of microscopy images. 2 - Refat Sharmin, Abul Bashar Mir Md Khademul Islam
:
Conserved antigenic sites between MERS-CoV and Bat-coronavirus are revealed through sequence analysis. 3 - Samson S. Kiware
, Tanya L. Russell
, Zacharia John Mtema, Alpha D. Malishee, Prosper Chaki, Dickson Lwetoijera, Javan Chanda, Dingani Chinula, Silas Majambere, John E. Gimnig, Thomas A. Smith
, Gerry F. Killeen:
A generic schema and data collection forms applicable to diverse entomological studies of mosquitoes. 4 - Fuquan Zhang
:
A flexible tool to plot a genomic map for single nucleotide polymorphisms. 5 - Deena M. A. Gendoo, Benjamin Haibe-Kains
:
MM2S: personalized diagnosis of medulloblastoma patients and model systems. 6 - Ana Gabriella de Oliveira Sardinha, Ceres Nunes de Resende Oyama, Armando de Mendonça Maroja
, Ivan F. Costa:
Implementation and clinical application of a deformation method for fast simulation of biological tissue formed by fibers and fluid. 7 - Caleb F. Davis
, Deborah I. Ritter, David A. Wheeler, Hongmei Wang, Yan Ding, Shannon P. Dugan, Matthew N. Bainbridge, Donna M. Muzny, Pulivarthi H. Rao, Tsz-Kwong Man
, Sharon E. Plon, Richard A. Gibbs, Ching C. Lau:
SV-STAT accurately detects structural variation via alignment to reference-based assemblies. 8 - John M. Macdonald, Paul C. Boutros
:
Log: : ProgramInfo: A Perl module to collect and log data for bioinformatics pipelines. 9 - Brigitte Glanzmann
, Hendri Herbst, Craig J. Kinnear
, Marlo Möller
, Junaid Gamieldien, Soraya Bardien
:
A new tool for prioritization of sequence variants from whole exome sequencing data. 10 - Lindsay V. Clark
, Erik J. Sacks:
TagDigger: user-friendly extraction of read counts from GBS and RAD-seq data. 11 - Toshiki Takeuchi
, Atsuo Yamada, Takashi Aoki, Kunihiro Nishimura:
cljam: a library for handling DNA sequence alignment/map (SAM) with parallel processing. 12 - Markus Riester
, Angad P. Singh, Angela Rose Brannon, Kun Yu, Catarina D. Campbell, Derek Y. Chiang
, Michael P. Morrissey:
PureCN: copy number calling and SNV classification using targeted short read sequencing. 13 - Syed Haider, Daryl Waggott, Emilie Lalonde
, Clement Fung, Fei-Fei Liu
, Paul C. Boutros
:
A bedr way of genomic interval processing. 14
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