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ORCIDJournal of Integrative Bioinformatics, Volume 16
Volume 16, Number 1, March 2019
- Florentino Fdez-Riverola
, Miguel Rocha:
Selected Extended Papers of the 12th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB). - Cindy Perscheid, Bastien Grasnick, Matthias Uflacker:
Integrative Gene Selection on Gene Expression Data: Providing Biological Context to Traditional Approaches. - Víctor Sebastián-Pérez, María Jimena Martínez, Carmen Gil, Nuria E. Campillo, Ana Martínez, Ignacio Ponzoni:
QSAR Modelling to Identify LRRK2 Inhibitors for Parkinson's Disease. - Niclas Ståhl, Göran Falkman, Alexander Karlsson, Gunnar Mathiason, Jonas Boström:
Deep Convolutional Neural Networks for the Prediction of Molecular Properties: Challenges and Opportunities Connected to the Data. - Vítor Vieira, Jorge Ferreira, Rúben Rodrigues, Filipe Liu, Miguel Rocha:
A Model Integration Pipeline for the Improvement of Human Genome-Scale Metabolic Reconstructions. - Alberto G. Salguero, Antonio J. Tomeu-Hardasmal, Manuel I. Capel:
Dynamic Load Balancing Strategy for Parallel Tumor Growth Simulations.
Volume 16, Number 2, June 2019
- Falk Schreiber, Björn Sommer, Gary D. Bader, Padraig Gleeson, Martin Golebiewski, Michael Hucka, Sarah M. Keating, Matthias König, Chris J. Myers, David P. Nickerson, Dagmar Waltemath:
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019. - Curtis Madsen, Ángel Goñi-Moreno, Umesh P, Zachary Palchick, Nicholas Roehner, Christian Atallah, Bryan Bartley, Kiri Choi, Robert Sidney Cox III, Thomas E. Gorochowski, Raik Grünberg, Chris Macklin, James Alastair McLaughlin, Xianwei Meng, Tramy Nguyen, Matthew R. Pocock, Meher Samineni, James Scott-Brown, Ysis Tarter, Michael Zhang, Zhen Zhang, Zach Zundel, Jacob Beal, Michael Bissell, Kevin Clancy, John H. Gennari, Goksel Misirli, Chris J. Myers, Ernst Oberortner, Herbert M. Sauro, Anil Wipat:
Synthetic Biology Open Language (SBOL) Version 2.3. - Adrien Rougny, Vasundra Touré, Stuart L. Moodie, Irina Balaur, Tobias Czauderna, Hanna Borlinghaus, Ugur Dogrusoz, Alexander Mazein, Andreas Dräger, Michael L. Blinov, Alice Villéger, Robin Haw, Emek Demir, Huaiyu Mi, Anatoly A. Sorokin, Falk Schreiber, Augustin Luna:
Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0. - Michael Hucka, Frank T. Bergmann, Claudine Chaouiya, Andreas Dräger, Stefan Hoops, Sarah M. Keating, Matthias König, Nicolas Le Novère, Chris J. Myers, Brett G. Olivier, Sven Sahle, James C. Schaff, Rahuman S. Malik-Sheriff, Lucian P. Smith, Dagmar Waltemath, Darren J. Wilkinson, Fengkai Zhang:
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2. - Curtis Madsen, Ángel Goñi-Moreno, Zachary Palchick, Umesh P, Nicholas Roehner, Bryan Bartley, Swapnil Bhatia, Shyam Bhakta, Mike Bissell, Kevin Clancy, Robert Sidney Cox III, Thomas E. Gorochowski, Raik Grünberg, Augustin Luna, James Alastair McLaughlin, Tramy Nguyen, Nicolas Le Novère, Matthew R. Pocock, Herbert M. Sauro, James Scott-Brown, John T. Sexton, Guy-Bart Stan, Jeffrey J. Tabor, Christopher A. Voigt, Zach Zundel, Chris J. Myers, Jacob Beal, Anil Wipat:
Synthetic Biology Open Language Visual (SBOL Visual) Version 2.1.
Volume 16, Number 3, September 2019
- Ming Chen, Ralf Hofestädt, Jan Taubert:
Integrative Bioinformatics: History and Future. - Dimitar Garkov, Karsten Klein, Christian Klukas, Falk Schreiber:
Mental-Map Preserving Visualisation of Partitioned Networks in Vanted. - Peijing Zhang, Wenyi Wu, Qi Chen, Ming Chen:
Non-Coding RNAs and their Integrated Networks. - Björn Sommer:
The CELLmicrocosmos Tools: A Small History of Java-Based Cell and Membrane Modelling Open Source Software Development. - Marcel Friedrichs, Alban Shoshi:
History and Future of KALIS: Towards Computer-assisted Decision Making in Prescriptive Medicine. - Jens Allmer:
Towards an Internet of Science. - Boas Pucker, Hanna Marie Schilbert, Sina Franziska Schumacher:
Integrating Molecular Biology and Bioinformatics Education. - Yaoyong Li, Elisa Aguilar-Martinez, Andrew D. Sharrocks:
Geno2proteo, a Tool for Batch Retrieval of DNA and Protein Sequences from Any Genomic or Protein Regions. - Nimisha Asati, Abhinav Mishra, Ankita Shukla, Tiratha Raj Singh:
Gene Expression Studies to Identify Significant Genes in AR, MTOR, MAPK Pathways and their Overlapping Regulatory Role in Prostate Cancer.
Volume 16, Number 4, December 2019
- Mehmood Ghaffar, Danuta Schüler, Patrick König, Daniel Arend, Astrid Junker, Uwe Scholz, Matthias Lange:
Programmatic Access to FAIRified Digital Plant Genetic Resources. - Marcel Friedrichs, Alban Shoshi, Piotr Chmura, Jon C. Ison, Veit Schwämmle, Falk Schreiber, Ralf Hofestädt, Björn Sommer:
JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools. - Saruar Alam, Md. Kamrul Hasan, Omar Hamza Bin Manjur, Akib Mahmud Khan, Zinat Sharmin, Mahmud Arif Pavel, Md. Faruk Hossain:
Predicting and Designing Epitope Ensemble Vaccines against HTLV-1. - Christophe Guyeux, Michel Salomon, Bashar Al-Nuaimi, Bassam AlKindy, Jean-François Couchot:
Ancestral Reconstruction and Investigations of Genomic Recombination on some Pentapetalae Chloroplasts. - Olga Vasieva, Igor Goryanin:
Is there a Function for a Sex Pheromone Precursor? - Olga I. Zolotareva, Maren Kleine:
A Survey of Gene Prioritization Tools for Mendelian and Complex Human Diseases.
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