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ORCIDComputational Biology and Chemistry, Volume 92
Volume 92, June 2021
- Ines Abdennaji
, Mourad Zaied, Jean-Marc Girault:
Prediction of protein structural class based on symmetrical recurrence quantification analysis. 107450 - Feng Li, Yi Jin, Xiaolu Pei, Peiyuan Guo, Keqin Dong, Haoyuan Wang, Yujia Chen, Peng Guo, Ling-Bing Meng, Zhiyu Wang:
Bioinformatics analysis and verification of gene targets for renal clear cell carcinoma. 107453 - Preeti Jha, Aruna Tiwari, Neha Bharill, Milind B. Ratnaparkhe, Mukkamalla Mounika, Neha Nagendra:
Apache Spark based kernelized fuzzy clustering framework for single nucleotide polymorphism sequence analysis. 107454 - Wentian Li, Andrew Shih, Yun Freudenberg-Hua, Wen Fury, Yaning Yang:
Beyond standard pipeline and p . 107455 - Yasir Hameed, Samina Ejaz:
Integrative analysis of multi-omics data highlighted TP53 as a potential diagnostic and prognostic biomarker of survival in breast invasive carcinoma patients. 107457 - Yazdan Rahmati, Mohammadreza Alivand, Hasan Mollanoori:
MiR-330-3p and miR-485-5p as biomarkers for glioblastoma: An integrated bioinformatics and experimental study. 107458 - Aline Silva da Costa, Tácio Vinício Amorim Fernandes, Murilo Lamim Bello, Theo Luiz Ferraz de Souza:
Evaluation of potential MHC-I allele-specific epitopes in Zika virus proteins and the effects of mutations on peptide-MHC-I interaction studied using in silico approaches. 107459 - Dayana A. Rodrigues, Bianca L. de Sousa, Júnio G. da Silva, Gustavo A. M. Pereira, Guilherme M. Bousada, Antonio Alberto da Silva, Antonio J. Demuner, Éderson D'M. Costa, Eduardo J. Pilau, Evandro Silva, Marcelo H. dos Santos:
Phytotoxic property of metabolites isolated from Garcinia gardneriana. 107460 - Sanjay Kumar Singh, M. Sudhakara Reddy:
Computational prediction of the effects of non-synonymous single nucleotide polymorphisms on the GPI-anchor transamidase subunit GPI8p of Plasmodium falciparum. 107461 - Md. Sajedul Islam, Md. Abdullah-Al-Kamran Khan:
Computational analysis revealed miRNAs produced by Chikungunya virus target genes associated with antiviral immune responses and cell cycle regulation. 107462 - Laurent Soulère, Thibaut Barbier, Yves Queneau:
Docking-based virtual screening studies aiming at the covalent inhibition of SARS-CoV-2 MPro by targeting the cysteine 145. 107463 - Reeham Motaher, Emilia Grill, Elise McKean, Eric Kenney, Ioannis Eleftherianos, John M. Hawdon, Damien O'Halloran:
Chemogenomic approach to identifying nematode chemoreceptor drug targets in the entomopathogenic nematode Heterorhabditis bacteriophora. 107464 - Pavan Krishna Kanchi, Ashok Kumar Dasmahapatra:
Enhancing the binding of the β-sheet breaker peptide LPFFD to the amyloid-β fibrils by aromatic modifications: A molecular dynamics simulation study. 107471 - Xue Li, Yuanji Li, Wenfei Song, Daohao Xie, Fangfang Zhu, Minghua Yang, Yahui Li:
cDNA cloning, expression and bioinformatical analysis of Tssk genes in tree shrews. 107474 - Loan Huynh, Jeanette Velásquez, Roel Rabara, Supratim Basu, Hau B. Nguyen, Goutam Gupta:
Rational design of antimicrobial peptides targeting Gram-negative bacteria. 107475 - Shuyu Wang, Peng Shan, Yuliang Zhao, Lei Zuo:
GanDTI: A multi-task neural network for drug-target interaction prediction. 107476 - Ramanathan Nivetha, Mani Meenakumari, Sreeramulu Bhuvaragavan, Karuppiah Hilda, Sundaram Janarthanan:
In silico analysis of carbohydrate-binding pockets in the lectin genes from various species of Canavalia. 107477 - Sushmitha Sriramulu, Suman K. Nandy, Harsha Ganesan, Antara Banerjee, Surajit Pathak:
In silico analysis and prediction of transcription factors of the proteins interacting with astrocyte elevated gene-1. 107478 - Titli Sarkar, Vijay V. Raghavan, Feng Chen, Andrew Riley, Sophia Zhou, Wu Xu:
Exploring the effectiveness of the TSR-based protein 3-D structural comparison method for protein clustering, and structural motif identification and discovery of protein kinases, hydrolases, and SARS-CoV-2's protein via the application of amino acid grouping. 107479 - Daniele Santoni:
The impact of flanking sequence features on DNA CpG methylation. 107480 - Ying-Zhan Sun, Jing-Wei Wu, Shan Du, Yang-Chun Ma, Liang Zhou, Ying Ma, Run-Ling Wang:
Design, synthesis, biological evaluation and molecular dynamics of LAR inhibitors. 107481 - Aurosikha Das, Soumendra Rana:
The role of human C5a as a non-genomic target in corticosteroid therapy for management of severe COVID19. 107482 - Supriyo Chakraborty, Durbba Nath, Parvin A. Barbhuiya, Yashmin Choudhury, Arif Uddin:
Silencing lung cancer genes using miRNAs identified by 7mer-seed matching. 107483 - Ajay S. Sawant, Sonali S. Kamble, Parshuram M. Pisal, Sanjay S. Sawant, Shrikant V. Hese, Kamini T. Bagul, Rahul V. Pinjari, Vinod T. Kamble, Rohan J. Meshram, Rajesh N. Gacche:
Synthesis and evaluation of N-(4-(substituted)-3-(trifluoromethyl) phenyl) isobutyramides and their N-ethyl analogous as anticancer, anti-angiogenic & antioxidant agents: In vitro and in silico analysis. 107484 - Boleslaw T. Karwowski:
The influence of oxoG on the electronic properties of ds-DNA. Damage versus mismatch: A theoretical approach. 107485 - Syed Shahariar Bappy, Abu Zaffar Shibly, Sorna Sultana, A. K. M. Mohiuddin, Yearul Kabir:
Designing potential siRNA molecule for the nucleocapsid(N) gene silencing of different SARS-CoV-2 strains of Bangladesh: Computational approach. 107486 - Izzuddin Ahmad Nadzirin, Adam Leow Thean Chor, Abu Bakar Salleh, Mohd Basyaruddin Abdul Rahman, Bimo Ario Tejo:
Discovery of new inhibitor for the protein arginine deiminase type 4 (PAD4) by rational design of α-enolase-derived peptides. 107487 - Priyanka Sarkar, Kavitha Thirumurugan:
In silico explanation for the causalities of deleterious RNF213 SNPs in Moyamoya disease and insulin resistance. 107488 - H. M. Fazlul Haque, Rafsanjani Muhammod, Fariha Arifin, Sheikh Adilina, Swakkhar Shatabda:
SubFeat: Feature subspacing ensemble classifier for function prediction of DNA, RNA and protein sequences. 107489 - Onur Serçinoglu, Ceyhun Bereketoglu, Per-Erik Olsson, Ajay Pradhan:
In silico and in vitro assessment of androgen receptor antagonists. 107490 - Ammar D. Elmezayen, Kemal Yelekçi:
Structure-based virtual screening for novel potential selective inhibitors of class IIa histone deacetylases for cancer treatment. 107491 - Vivitri Dewi Prasasty, Rory Anthony Hutagalung, Reinhart Gunadi, Dewi Yustika Sofia, Rosmalena Rosmalena, Fatmawaty Yazid, Ernawati Sinaga:
Prediction of human-Streptococcus pneumoniae protein-protein interactions using logistic regression. 107492 - Kevin Nathanael Ramanto, Rizky Nurdiansyah:
Immunogenicity and structural efficacy of P41 of Plasmodium sp. as potential cross-species blood-stage malaria vaccine. 107493 - Samia Tasnim Sara, Md. Mehedi Hasan, Ahsan Ahmad, Swakkhar Shatabda:
Convolutional neural networks with image representation of amino acid sequences for protein function prediction. 107494 - Kevin Nathanael Ramanto, Rizky Nurdiansyah:
Structural and immunogenicity analysis of reconstructed ancestral and consensus P48/45 for cross-species anti malaria transmission-blocking vaccine. 107495 - Chayanika Chaliha, V. Chandra Kaladhar, Robin Doley, Praveen Kumar Verma, Aditya Kumar, Eeshan Kalita:
Bipartite molecular approach for species delimitation and resolving cryptic speciation of Exobasidium vexans within the Exobasidium genus. 107496 - Jeremias Ivan, Gabriella Patricia, David Agustriawan:
In silico study of cancer stage-specific DNA methylation pattern in White breast cancer patients based on TCGA dataset. 107498 - Stephen Among James, Wai Keat Yam:
Sub-structure-based screening and molecular docking studies of potential enteroviruses inhibitors. 107499 - Sona Charles, Jeyakumar Natarajan:
Integrated regulatory network based on lncRNA-miRNA-mRNA-TF reveals key genes and sub-networks associated with dilated cardiomyopathy. 107500 - Vannajan Sanghiran Lee, Sri Devi Sukumaran, Pak Kheong Tan, Umah Rani Kuppusamy, Bavani Arumugam:
Role of surface-exposed charged basic amino acids (Lys, Arg) and guanidination in insulin on the interaction and stability of insulin-insulin receptor complex. 107501 - Sayed Mehedi Azim, Md. Rakibul Haque, Swakkhar Shatabda:
OriC-ENS: A sequence-based ensemble classifier for predicting origin of replication in S. cerevisiae. 107502 - Anjan Kumar Payra, Banani Saha, Anupam Ghosh:
Ortho_Sim_Loc: Essential protein prediction using orthology and priority-based similarity approach. 107503 - Sneha Rai, Venugopal Bhatia, Sonika Bhatnagar:
Drug repurposing for hyperlipidemia associated disorders: An integrative network biology and machine learning approach. 107505 - Vinay Randhawa, Manoj Kumar:
Analysis of aging-related protein interactome and cross-network module comparisons across tissues provide new insights into aging. 107506
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