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ORCIDIWBBIO 2018: Granada, Spain
- Ignacio Rojas, Francisco M. Ortuño Guzman:
Bioinformatics and Biomedical Engineering - 6th International Work-Conference, IWBBIO 2018, Granada, Spain, April 25-27, 2018, Proceedings, Part I. Lecture Notes in Computer Science 10813, Springer 2018, ISBN 978-3-319-78722-0
Bioinformatics for Healthcare and Diseases
- Antonín Bárta, Pavel Soucek, Vladyslav Bozhynov, Pavla Urbanová
, Dinara Bekkozhayeova:
Trends in Online Biomonitoring. 3-14 - Haitham Maarouf, Vanessa López, María Jesús Sobrido, Diego Martínez, Maria Taboada:
SARAEasy: A Mobile App for Cerebellar Syndrome Quantification and Characterization. 15-25 - X. P. Blanco-Valencia, D. Bastidas Torres, C. Piñeros Rodriguez, Diego Hernán Peluffo-Ordóñez, Miguel A. Becerra, Andrés Eduardo Castro-Ospina:
Case-Based Reasoning Systems for Medical Applications with Improved Adaptation and Recovery Stages. 26-38
Bioinformatics Tools to Integrate Omics Dataset and Address Biological Question
- András Gézsi, Bence Bruncsics, Gábor Guta, Peter Antal:
Constructing a Quantitative Fusion Layer over the Semantic Level for Scalable Inference. 41-53
Challenges and Advances in Measurement and Self-Parametrization of Complex Biological Systems
- Ramón Enrique Ramayo González, José Radamés Ferreira da Silva, Romildo Albuquerque Nogueira:
Effects of External Voltage in the Dynamics of Pancreatic β-Cells: Implications for the Treatment of Diabetes. 57-70 - Hossam Al Meer, Raghvendra Mall, Ehsan Ullah, Nasreddine Megrez, Halima Bensmail:
ISaaC: Identifying Structural Relations in Biological Data with Copula-Based Kernel Dependency Measures. 71-82 - Pedro Pablo González Pérez, Maura Cárdenas-García:
Inspecting the Role of PI3K/AKT Signaling Pathway in Cancer Development Using an In Silico Modeling and Simulation Approach. 83-95 - Fabián M. Lopez-Chamorro, Andrés F. Arciniegas-Mejía, David Esteban Imbajoa-Ruiz, Paul D. Rosero-Montalvo, Pedro García, Andrés Eduardo Castro-Ospina, Antonio Acosta, Diego Hernán Peluffo-Ordóñez:
Cardiac Pulse Modeling Using a Modified van der Pol Oscillator and Genetic Algorithms. 96-106 - Vladyslav Bozhynov, Pavel Soucek, Antonín Bárta, Pavla Urbanová, Dinara Bekkozhayeva:
Visible Aquaphotomics Spectrophotometry for Aquaculture Systems. 107-117 - Jan Urban:
Resolution, Precision, and Entropy as Binning Problem in Mass Spectrometry. 118-128 - Efraín Martínez, Luis Guillermo Hernández, Javier Mauricio Antelis:
Discrimination Between Normal Driving and Braking Intention from Driver's Brain Signals. 129-138 - Pavla Urbanová, Norbert Cyran, Pavel Soucek, Antonín Bárta, Vladyslav Bozhynov, Dinara Bekkhozhayeva, Petr Císar, Milos Zelezný:
Unsupervised Parametrization of Nano-Objects in Electron Microscopy. 139-149
Computational Genomics
- Leon Bobrowski, Pawel Zabielski:
Models of Multiple Interactions from Collinear Patterns. 153-165 - Ashraf Abou Tabl, Abedalrhman Alkhateeb, Luis Rueda, Waguih H. ElMaraghy, Alioune Ngom:
Identification of the Treatment Survivability Gene Biomarkers of Breast Cancer Patients via a Tree-Based Approach. 166-176 - Ricardo Holthausen, Sergio Díaz Del Pino, Esteban Pérez-Wohlfeil, Pablo Rodríguez-Brazzarola, Oswaldo Trelles:
Workflows and Service Discovery: A Mobile Device Approach. 177-185 - Michael G. Sadovsky, Maria Senashova, Andrew Malyshev:
Chloroplast Genomes Exhibit Eight-Cluster Structuredness and Mirror Symmetry. 186-196 - Joanna Tobiasz, Najla Al-Harbi, Sara Bin Judia, Salma Majid, Ghazi Alsbeih, Joanna Polanska:
Are Radiosensitive and Regular Response Cells Homogeneous in Their Correlations Between Copy Number State and Surviving Fraction After Irradiation? 197-208
Computational Proteomics
- Óscar Álvarez, Juan Luis Fernández Martínez, Ana Cernea, María Zulima Fernández-Muñiz, Andrzej Kloczkowski:
Protein Tertiary Structure Prediction via SVD and PSO Sampling. 211-220 - Edgar D. Coelho, Joel P. Arrais, José Luís Oliveira:
Fighting Fire with Fire: Computational Prediction of Microbial Targets for Bacteriocins. 221-234 - Renzo Angles, Mauricio Arenas:
A Graph-Based Approach for Querying Protein-Ligand Structural Patterns. 235-244
Computational Systems for Modelling Biological Processes
- Ping Luo, Li-Ping Tian, Bolin Chen, Qianghua Xiao, Fang-Xiang Wu:
Predicting Disease Genes from Clinical Single Sample-Based PPI Networks. 247-258 - Kristína Kovalcíková, Alzbeta Bohiniková, Martin Slavík, Isabelle Mazza Guimaraes, Ivan Cimrák:
Red Blood Cell Model Validation in Dynamic Regime. 259-269 - Guray Golcuk, Mustafa Anil Tuncel, Arif Canakoglu:
Exploiting Ladder Networks for Gene Expression Classification. 270-278 - Hynek Bachratý, Katarína Bachratá, Michal Chovanec, Frantisek Kajánek, Monika Smiesková, Martin Slavík:
Simulation of Blood Flow in Microfluidic Devices for Analysing of Video from Real Experiments. 279-289 - Emmanuel Adetiba, Oludayo O. Olugbara, Tunmike B. Taiwo, Marion O. Adebiyi, Joke A. Badejo, Matthew Boladele Akanle, Victor O. Matthews:
Alignment-Free Z-Curve Genomic Cepstral Coefficients and Machine Learning for Classification of Viruses. 290-301 - Liliana Losurdo, Annarita Fanizzi, Teresa Maria Altomare Basile, Roberto Bellotti, Ubaldo Bottigli, Rosalba Dentamaro, Vittorio Didonna, Alfonso Fausto, Raffaella Massafra, Alfonso Monaco, Marco Moschetta, Ondina Popescu, Pasquale Tamborra, Sabina Tangaro, Daniele La Forgia:
A Combined Approach of Multiscale Texture Analysis and Interest Point/Corner Detectors for Microcalcifications Diagnosis. 302-313 - Mohammed Rais, Abdelmonaime Lachkar:
An Empirical Study of Word Sense Disambiguation for Biomedical Information Retrieval System. 314-326
Drug Delivery System Design Aided by Mathematical Modelling and Experiments
- Kristinn Gudnason, Sven Sigurdsson, Fjola Jonsdottir, António Jorge Guiomar, A. P. Vieira, Patrícia Alves, Patrícia Coimbra, Maria Helena Gil:
Modelling the Release of Moxifloxacin from Plasma Grafted Intraocular Lenses with Rotational Symmetric Numerical Framework. 329-339
Generation, Management and Biological Insights from Big Data
- Osama Hamzeh, Abedalrhman Alkhateeb, Luis Rueda:
Predicting Tumor Locations in Prostate Cancer Tissue Using Gene Expression. 343-351 - Pavel Blazek, Kamil Kuca, Ondrej Krejcar:
Concept of a Module for Physical Security of Material Secured by LIMS. 352-363 - Angeles Arzalluz-Luque, Guillaume Devailly, Anagha Joshi:
scFeatureFilter: Correlation-Based Feature Filtering for Single-Cell RNAseq. 364-370
High-Throughput Bioinformatic Tools for Medical Genomics
- Rafael Larrosa, Macarena Arroyo, Rocío Bautista, Carmen María López-Rodríguez, M. Gonzalo Claros:
NearTrans Can Identify Correlated Expression Changes Between Retrotransposons and Surrounding Genes in Human Cancer. 373-382 - Alexandre V. Fassio, Charles Abreu Santana, Fabio Ribeiro Cerqueira, Carlos Henrique da Silveira, João P. R. Romanelli, Raquel Cardoso de Melo Minardi, Sabrina de Azevedo Silveira:
An Interactive Strategy to Visualize Common Subgraphs in Protein-Ligand Interaction. 383-394 - Beat Wolf, Pierre Kuonen, Thomas Dandekar:
Meta-Alignment: Combining Sequence Aligners for Better Results. 395-404 - Zeeshan Ali Shah, Mohamed El-Kalioby, Tariq Faquih, Moustafa Shokrof, Shazia Subhani, Yasser Alnakhli, Hussain Aljafar, Ashiq Anjum, Mohamed Abouelhoda:
Exploiting In-memory Systems for Genomic Data Analysis. 405-414 - Fábio Miranda, Cassio T. Batista, Artur Silva, Jefferson Morais, Nelson Neto, Rommel Ramos:
Improving Metagenomic Assemblies Through Data Partitioning: A GC Content Approach. 415-425
Next Generation Sequencing and Sequence Analysis
- Ali Fotouhi, Mina Majidi, M. Oguzhan Külekci:
Quality Assessment of High-Throughput DNA Sequencing Data via Range Analysis. 429-438 - Jan Fostier:
A BLAS-Based Algorithm for Finding Position Weight Matrix Occurrences in DNA Sequences on CPUs and GPUs. 439-449 - Pablo Rodríguez-Brazzarola, Esteban Pérez-Wohlfeil, Sergio Díaz Del Pino, Ricardo Holthausen, Oswaldo Trelles:
Analyzing the Differences Between Reads and Contigs When Performing a Taxonomic Assignment Comparison in Metagenomics. 450-460 - Xuan Feng, Huan Hu, Zhongmeng Zhao, Xuanping Zhang, Jiayin Wang:
Estimating the Length Distributions of Genomic Micro-satellites from Next Generation Sequencing Data. 461-472 - Tian Zheng, Yang Li, Yu Geng, Zhongmeng Zhao, Xuanping Zhang, Xiao Xiao, Jiayin Wang:
CIGenotyper: A Machine Learning Approach for Genotyping Complex Indel Calls. 473-485 - Max H. Garzon, Duy T. Pham:
Genomic Solutions to Hospital-Acquired Bacterial Infection Identification. 486-497
Interpretable Models in Biomedicine and Bioinformatics
- Ferran Reverter, Esteban Vegas, Josep M. Oller:
Kernel Conditional Embeddings for Associating Omic Data Types. 501-510 - Iker Malaina, Leire Legarreta, Maria Dolores Boyano, Jesus Gardeazabal, Carlos Bringas, Luis Martínez, Ildefonso Martinez de la Fuente:
Metastasis of Cutaneous Melanoma: Risk Factors, Detection and Forecasting. 511-519 - Ertan Tolan, Zerrin Isik:
Graph Theory Based Classification of Brain Connectivity Network for Autism Spectrum Disorder. 520-530 - Sara Nasiri, Matthias Jung, Julien Helsper, Madjid Fathi:
Detect and Predict Melanoma Utilizing TCBR and Classification of Skin Lesions in a Learning Assistant System. 531-542 - Muhammad Tariq Saeed, Jamil Ahmad, Amjad Ali:
On the Use of Betweenness Centrality for Selection of Plausible Trajectories in Qualitative Biological Regulatory Networks. 543-552
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