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ORCID11th ISBRA 2015: Norfolk, VA, USA
- Robert W. Harrison, Yaohang Li, Ion I. Mandoiu:
Bioinformatics Research and Applications - 11th International Symposium, ISBRA 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings. Lecture Notes in Computer Science 9096, Springer 2015, ISBN 978-3-319-19047-1 - Kamal Al-Nasr, Jing He
:
Deriving Protein Backbone Using Traces Extracted from Density Maps at Medium Resolutions. 1-11 - Emi Ayada, Atsushi Niida, Takanori Hasegawa, Satoru Miyano, Seiya Imoto:
Binary Contingency Table Method for Analyzing Gene Mutation in Cancer Genome. 12-23 - Md. Aashikur Rahman Azim, Costas S. Iliopoulos, M. Sohel Rahman, M. Samiruzzaman:
A Filter-Based Approach for Approximate Circular Pattern Matching. 24-35 - Arkadiusz Betkier, Pawel Szczesny, Pawel Górecki:
Fast Algorithms for Inferring Gene-Species Associations. 36-47 - Sourya Bhattacharyya, Jayanta Mukhopadhyay:
Couplet Supertree Based Species Tree Estimation. 48-59 - Abhishek Biswas, Desh Ranjan, Mohammad Zubair, Jing He:
A Novel Computational Method for Deriving Protein Secondary Structure Topologies Using Cryo-EM Density Maps and Multiple Secondary Structure Predictions. 60-71 - John Christopher Bowers, Rose Tharail John, Ileana Streinu:
Managing Reproducible Computational Experiments with Curated Proteins in KINARI-2. 72-83 - Imren Dinç, Marc L. Pusey, Ramazan S. Aygün:
Protein Crystallization Screening Using Associative Experimental Design. 84-95 - Xuan Guo, Jing Zhang, Zhipeng Cai, Ding-Zhu Du, Yi Pan:
DAM: A Bayesian Method for Detecting Genome-wide Associations on Multiple Diseases. 96-107 - Dan He, Zhanyong Wang, Laxmi Parida:
MINED: An Efficient Mutual Information Based Epistasis Detection Method to Improve Quantitative Genetic Trait Prediction. 108-124 - Nic Herndon, Doina Caragea:
Domain Adaptation with Logistic Regression for the Task of Splice Site Prediction. 125-137 - Qiwen Hu, Catharina Merchante, Anna N. Stepanova, José M. Alonso, Steffen Heber:
A Stacking-Based Approach to Identify Translated Upstream Open Reading Frames in Arabidopsis Thaliana. 138-149 - Yuanyuan Huang, Kejue Jia, Robert L. Jernigan, Zhijun Wu:
PRESS-PLOT: An Online Server for Protein Structural Analysis and Evaluation with Residue-level Virtual Angle Correlation Plots. 150-161 - Hao Ji, Yaohang Li, Seth H. Weinberg:
Calcium Ion Fluctuations Alter Channel Gating in a Stochastic Luminal Calcium Release Site Model. 162-174 - Kevin Molloy, Amarda Shehu:
Interleaving Global and Local Search for Protein Motion Computation. 175-186 - Misagh Kordi, Mukul S. Bansal:
On the Complexity of Duplication-Transfer-Loss Reconciliation with Non-binary Gene Trees. 187-198 - Jin Li, Yen Kaow Ng, Xingwu Liu, Shuai Cheng Li:
On the Near-Linear Correlation of the Eigenvalues Across BLOSUM Matrices. 199-210 - Menglu Li, Micheal Cheng, Yongtao Ye, Wing-Kai Hon, Hing-Fung Ting, Tak Wah Lam, Cy Tang, Thomas Wong, Siu-Ming Yiu:
Predicting RNA Secondary Structures: One-grammar-fits-all Solution. 211-222 - Yi Liu, Weiping Sun, Gilles A. Lajoie, Bin Ma, Kaizhong Zhang:
An Approach for Matching Mixture MS/MS Spectra with a Pair of Peptide Sequences in a Protein Database. 223-234 - Veli Mäkinen, Daniel Valenzuela:
Diploid Alignments and Haplotyping. 235-246 - Vinicius Schmitz Nunes, Eveline Gomes Vasconcelos, Priscila Faria-Pinto, Carlos Cristiano H. Borges, Priscila V. S. Z. Capriles:
Structural Comparative Analysis of Ecto- NTPDase Models from S. Mansoni and H. Sapiens. 247-259 - Ashok Rajaraman, Cédric Chauve, Yann Ponty:
Assessing the Robustness of Parsimonious Predictions for Gene Neighborhoods from Reconciled Phylogenies: Supplementary Material. 260-271 - Gustavo Rodrigues Galvão, Christian Baudet, Zanoni Dias:
Sorting Signed Circular Permutations by Super Short Reversals. 272-283 - Kaushik Roy, Satish Chandra Panigrahi, Asish Mukhopadhyay:
Multiple Alignment of Structures Using Center Of ProTeins. 284-296 - Subrata Saha, Sanguthevar Rajasekaran:
NRRC: A Non-referential Reads Compression Algorithm. 297-308 - Md. Kishwar Shafin, Kazi Lutful Kabir, Iffatur Ridwan, Tasmiah Tamzid Anannya, Rashid Saadman Karim, Mohammad Mozammel Hoque, M. Sohel Rahman:
New Heuristics for Clustering Large Biological Networks. 309-319 - Weiping Sun, Gilles A. Lajoie, Bin Ma, Kaizhong Zhang:
A Novel Algorithm for Glycan de novo Sequencing Using Tandem Mass Spectrometry. 320-330 - Karthik Tangirala, Nic Herndon, Doina Caragea:
Community Detection-Based Feature Construction for Protein Sequence Classification. 331-342 - Jing Xu, Andrey N. Chernikov:
Curvilinear Triangular Discretization of Biomedical Images. 343-354 - Yubo Yang, Cuihong Dai, Zhipeng Cai, Aiju Hou, Dayou Cheng, Dechang Xu:
The Role of miRNAs in Cisplatin-Resistant HeLa Cells. 355-365 - Ning Yu, Xuan Guo, Feng Gu, Yi Pan:
DNA AS X: An Information-Coding-Based Model to Improve the Sensitivity in Comparative Gene Analysis. 366-377 - Yun Yu, Luay Nakhleh:
A Distance-Based Method for Inferring Phylogenetic Networks in the Presence of Incomplete Lineage Sorting. 378-389 - Bihai Zhao, Jianxin Wang, Fang-Xiang Wu, Yi Pan:
Predicting Protein Functions Based on Dynamic Protein Interaction Networks. 390-401 - Jun Zhou, Yu Lin, William Hoskins, Jijun Tang:
An Iterative Approach for Phylogenetic Analysis of Tumor Progression Using FISH Copy Number. 402-412
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