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ORCID8th ISBRA 2012: Dallas, TX, USA
- Leonidas G. Bleris, Ion I. Mandoiu
, Russell Schwartz, Jianxin Wang:
Bioinformatics Research and Applications - 8th International Symposium, ISBRA 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings. Lecture Notes in Computer Science 7292, Springer 2012, ISBN 978-3-642-30190-2 - Isra Al-Turaiki, Ghada Badr, Hassan Mathkour:
Trie-based Apriori Motif Discovery Approach. 1-12 - Laurent Bulteau, Minghui Jiang:
Inapproximability of (1, 2)-Exemplar Distance. 13-23 - Daniele Catanzaro, Martine Labbé, Bjarni V. Halldórsson:
A Mixed Integer Programming Model for the Parsimonious Loss of Heterozygosity Problem. 24-35 - Xi Chen, Chen Wang, Ayesha N. Shajahan, Rebecca B. Riggins, Robert Clarke, Jianhua Xuan:
Reconstruction of Transcription Regulatory Networks by Stability-Based Network Component Analysis. 36-47 - Yann Christinat, Bernard M. E. Moret:
A Transcript Perspective on Evolution. 48-59 - Ralph W. Crosby, Tiffani L. Williams:
A Fast Algorithm for Computing the Quartet Distance for Large Sets of Evolutionary Trees. 60-71 - Peter Damaschke, Leonid Molokov:
Error Propagation in Sparse Linear Systems with Peptide-Protein Incidence Matrices. 72-83 - Bhaskar DasGupta:
Models and Algorithmic Tools for Computational Processes in Cellular Biology: Recent Developments and Future Directions - (Invited Keynote Talk). 84-86 - Akshay Deepak, Jianrong Dong, David Fernández-Baca:
Identifying Rogue Taxa through Reduced Consensus: NP-Hardness and Exact Algorithms. 87-98 - Cynthia Gibas:
Analytics Approaches for the Era of 10, 000* Genomes *and Counting. 99-101 - Pawel Górecki, J. Gordon Burleigh, Oliver Eulenstein:
GTP Supertrees from Unrooted Gene Trees: Linear Time Algorithms for NNI Based Local Searches. 102-114 - Pawel Górecki, Oliver Eulenstein:
A Robinson-Foulds Measure to Compare Unrooted Trees with Rooted Trees. 115-126 - Fei Guo, Shuai Cheng Li, Lusheng Wang:
P-Binder: A System for the Protein-Protein Binding Sites Identification. 127-138 - Bonnie Kirkpatrick:
Non-identifiable Pedigrees and a Bayesian Solution. 139-152 - Juntao Li, Kwok Pui Choi, R. Krishna Murthy Karuturi:
Iterative Piecewise Linear Regression to Accurately Assess Statistical Significance in Batch Confounded Differential Expression Analysis. 153-164 - Si Li, Kwok Pui Choi, Taoyang Wu, Louxin Zhang:
Reconstruction of Network Evolutionary History from Extant Network Topology and Duplication History. 165-176 - Victor Missirian, Isabelle Henry, Luca Comai, Vladimir Filkov:
POPE: Pipeline of Parentally-Biased Expression. 177-188 - Jirí Novák, David Hoksza, Jakub Lokoc, Tomás Skopal:
On Optimizing the Non-metric Similarity Search in Tandem Mass Spectra by Clustering. 189-200 - Aïda Ouangraoua, Krister M. Swenson, Anne Bergeron:
On the Comparison of Sets of Alternative Transcripts. 201-212 - Hyun Jung Park, Luay Nakhleh:
MURPAR: A Fast Heuristic for Inferring Parsimonious Phylogenetic Networks from Multiple Gene Trees. 213-224 - Matteo Re, Giorgio Valentini:
Large Scale Ranking and Repositioning of Drugs with Respect to DrugBank Therapeutic Categories. 225-236 - Debarka Sengupta, Ujjwal Maulik, Sanghamitra Bandyopadhyay:
Score Based Aggregation of microRNA Target Orderings. 237-248 - Ambuj K. Singh:
Modeling Complex Diseases Using Discriminative Network Fragments - (Invited Keynote Talk). 249 - Ayshwarya Subramanian, Stanley Shackney, Russell Schwartz:
Novel Multi-sample Scheme for Inferring Phylogenetic Markers from Whole Genome Tumor Profiles. 250-262 - André Wehe, J. Gordon Burleigh, Oliver Eulenstein:
Algorithms for Knowledge-Enhanced Supertrees. 263-274 - Lars Wienbrandt, Daniel Siebert, Manfred Schimmler:
Improvement of BLASTp on the FPGA-Based High-Performance Computer RIVYERA. 275-286 - Tim Wylie, Binhai Zhu:
A Polynomial Time Solution for Protein Chain Pair Simplification under the Discrete Fréchet Distance. 287-298 - Rukhsana Yeasmin, Steven Skiena:
Designing RNA Secondary Structures in Coding Regions. 299-314 - Junjie Yu, Henry Chi-Ming Leung, Siu-Ming Yiu, Yong Zhang, Francis Y. L. Chin, Nathan Hobbs, Amy Y. X. Wang:
Phylogenetic Tree Reconstruction with Protein Linkage. 315-327 - Jingfen Zhang, Dong Xu:
Protein Structure Prediction and Clustering Using MUFOLD. 328-329 - Michael Q. Zhang:
Computational Modeling of Mammalian Promoters - (Invited Keynote Talk). 330
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